eva-smorodina / antibody_developability
☆9Updated 2 years ago
Alternatives and similar repositories for antibody_developability:
Users that are interested in antibody_developability are comparing it to the libraries listed below
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆11Updated last year
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆16Updated 7 months ago
- ☆13Updated 4 months ago
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆16Updated 3 years ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆27Updated last year
- Fast deep learning methods for large-scale protein-protein interaction screening☆36Updated 6 months ago
- ☆17Updated last year
- Predicting Nanobody Binding Epitopes Based on a Pretrained RoBERTa-based Model☆14Updated 10 months ago
- MEGADOCK on Google Colaboratory☆16Updated last year
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆16Updated last year
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆27Updated last year
- ☆21Updated 3 months ago
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆22Updated 9 months ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆25Updated 9 months ago
- ☆24Updated 3 years ago
- Fragment binding prediction with ColabFold☆33Updated last month
- Code for deep learning guided design of dynamic proteins☆17Updated 9 months ago
- An antibody-specific language model focusing on NGL prediction☆26Updated 8 months ago
- Tools for annotation, processing and ML for antibody sequences☆27Updated last week
- ☆26Updated 2 months ago
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆16Updated 4 months ago
- Some scripts that I keep using over and over.☆18Updated 3 months ago
- ☆12Updated 4 years ago
- Extension of ThermoMPNN for double mutant predictions☆32Updated last month
- ☆14Updated 10 months ago
- Metrics for our protein design competitions.☆26Updated 5 months ago
- Epitope Prediction Pipeline and analysis tools built around AlphaFold 2☆18Updated 11 months ago
- Computationally Restoring the Potency of a Clinical Antibody☆18Updated last year
- Official open-source of Antibody Design Using a Score-based Diffusion Model Guided by Evolutionary, Physical, and Geometric Constraints☆30Updated 3 months ago
- ☆34Updated 7 months ago