iFeature is a comprehensive Python-based toolkit for generating various numerical feature representation schemes from protein or peptide sequences. iFeature is capable of calculating and extracting a wide spectrum of 18 major sequence encoding schemes that encompass 53 different types of feature descriptors. Furthermore, iFeature also integrates…
☆195May 23, 2022Updated 3 years ago
Alternatives and similar repositories for iFeature
Users that are interested in iFeature are comparing it to the libraries listed below
Sorting:
- iLearn, a Python Toolkit and Web Server Integrating the Functionality of Feature Calculation, Extraction, Clustering, Feature Selection, …☆85Jul 20, 2022Updated 3 years ago
- Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.☆61Feb 2, 2026Updated last month
- iLearnPlus is the first machine-learning platform with both graphical- and web-based user interface that enables the construction of auto…☆123Apr 15, 2024Updated last year
- fragbuilder is a tool to create, setup and analyze QM calculations on peptides.☆15Oct 31, 2014Updated 11 years ago
- A Python-based Effective Feature Generation Tool from DNA, RNA, and Protein Sequences☆97Aug 14, 2022Updated 3 years ago
- A deep learning model to predict anticancer peptides.☆24Jul 10, 2019Updated 6 years ago
- A software package for computing features of peptides and proteins☆66Jun 7, 2024Updated last year
- Long short-term memory recurrent neural networks for learning peptide and protein sequences to later design new, similar examples.☆77Mar 25, 2023Updated 2 years ago
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆33May 23, 2022Updated 3 years ago
- A Python 3 version of the protein descriptor package propy☆49Feb 8, 2023Updated 3 years ago
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆32Aug 16, 2023Updated 2 years ago
- A new approach for representing biological sequences☆101Sep 14, 2024Updated last year
- ☆14Jul 12, 2021Updated 4 years ago
- webserver☆28Jun 4, 2025Updated 9 months ago
- AnnapuRNA: a scoring function for predicting RNA-small molecule interactions.☆21Apr 5, 2024Updated last year
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆34Nov 18, 2023Updated 2 years ago
- An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.☆98Jan 23, 2024Updated 2 years ago
- Fast protein structure searching or your money back☆118Updated this week
- FingerPrint Kit - Python-based cheminformatics package for fingerprint-related tasks☆12Jun 4, 2025Updated 9 months ago
- machine learning, molecular descriptor☆120Apr 10, 2023Updated 2 years ago
- Peptide Virtual Screening Pipeline☆14Jul 3, 2019Updated 6 years ago
- ☆23Jul 27, 2021Updated 4 years ago
- Spatiotemporal identification of druggable binding sites using deep learning☆22Mar 16, 2021Updated 5 years ago
- antimicrobial peptide prediction in R☆33Dec 17, 2024Updated last year
- POOL (Peptide Optimization with Optimal Learning): code for "Discovering de novo peptide substrates for enzymes using machine learning"☆10Oct 18, 2018Updated 7 years ago
- ☆20Jun 10, 2024Updated last year
- ☆17Mar 11, 2023Updated 3 years ago
- ☆16Nov 19, 2023Updated 2 years ago
- ☆49Oct 8, 2020Updated 5 years ago
- Parametric Building of de novo Functional Topologies☆44Mar 11, 2022Updated 4 years ago
- Peptide library design☆23Sep 8, 2020Updated 5 years ago
- Amino-Acid Sequence Annotation Predictor (ASAP)☆25May 13, 2020Updated 5 years ago
- Full-length protein structure determination from cryo-EM maps using deep learning☆15May 28, 2023Updated 2 years ago
- ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit a…☆1,293May 22, 2025Updated 9 months ago
- BioSeq-BLM: a platform for analyzing DNA, RNA and protein sequences based on biological language models☆14Aug 21, 2022Updated 3 years ago
- ☆12Dec 10, 2020Updated 5 years ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Aug 26, 2024Updated last year
- Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models☆12Dec 20, 2022Updated 3 years ago
- 💊 Molecular informatics toolkit with integration of bioinformatics and cheminformatics tools for drug discovery☆37Sep 18, 2024Updated last year