Alternatives and similar repositories for dicom_wsi

Users that are interested in dicom_wsi are comparing it to the libraries listed below

• GoogleCloudPlatform / wsi-to-dicom-converter
  Conversion tool/library for converting whole slide images to DICOM
  ☆82Updated 6 months ago
• bgilbert / anonymize-slide
  Delete the label from a whole-slide image
  ☆65Updated 4 years ago
• imi-bigpicture / wsidicom
  Python package for reading DICOM WSI file sets.
  ☆44Updated 2 months ago
• DigitalSlideArchive / digital_slide_archive
  The official deployment of the Digital Slide Archive and HistomicsTK.
  ☆125Updated this week
• DigitalSlideArchive / HistomicsUI
  A Girder plugin for pathology image annotations and analysis.
  ☆73Updated this week
• DigitalSlideArchive / DSA-WSI-DeID
  A workflow for redacting PHI from whole slide images (WSI) based on the Digital Slide Archive.
  ☆17Updated 2 weeks ago
• Pathomation / pma_python
  Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy
  ☆31Updated 8 months ago
• AICAN-Research / FAST-Pathology
  ⚡ Open-source software for deep learning-based digital pathology
  ☆134Updated last year
• Booritas / slideio
  ☆71Updated last month
• imi-bigpicture / wsidicomizer
  Python library for converting WSI files to DICOM
  ☆76Updated 2 months ago
• computationalpathologygroup / pythostitcher
  Python tool for stitching histopathology tissue fragments into artificial whole-mounts.
  ☆22Updated 4 months ago
• hilfikerp / TCIA-Python3-Downloader
  The Cancer Imaging Archive (TCIA) Web Service Client Python Application
  ☆16Updated 7 years ago
• ImagingDataCommons / slim
  Interoperable web-based DICOM slide microscopy viewer and annotation tool
  ☆140Updated 2 weeks ago
• andreped / NoCodeSeg
  🔬 Code-free deep segmentation for computational pathology
  ☆55Updated last year
• haranrk / DigiPathAI
  Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay
  ☆72Updated 7 months ago
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆81Updated 2 weeks ago
• qupath / qupath-extension-wsinfer
  QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/
  ☆24Updated last month
• DIMAthe47 / slide_viewer_47
  A pyqt5 widget for viewing whole-slide images with Openslide
  ☆22Updated 7 years ago
• amspath / slidescape
  ☆26Updated 3 weeks ago
• AIM-Harvard / SlicerRadiomics
  A Slicer extension to provide a GUI around pyradiomics
  ☆114Updated last year
• DeepMIALab / AI-FFPE
  Deep Learning-based Frozen Section to FFPE Translation
  ☆62Updated 10 months ago
• daangeijs / simple_wsi_viewer
  A simple web application for for viewing and navigating pathology whole-slide-images in your browser.
  ☆15Updated last year
• smujiang / WSI2DICOM
  Simple prototype of converting whole slide image (WSI) to multiframe DICOM images
  ☆15Updated 2 years ago
• pearcetm / svs-deidentifier
  Strip potentially identifying label and macro images from Aperio SVS whole slide image files
  ☆35Updated last year
• choosehappy / HistoQC
  HistoQC is an open-source quality control tool for digital pathology slides
  ☆300Updated 2 weeks ago
• MITEL-UNIUD / SlideJ
  SlideJ: an ImageJ plugin for WSI processing
  ☆16Updated 5 years ago
• DIAGNijmegen / pathology-hooknet
  ☆62Updated 10 months ago
• smujiang / WSITools
  Tools for whole slide image (WSI) processing. Especially for (pairwise) patch extraction, annotation parsing and data preparation for dee…
  ☆54Updated 8 months ago
• DIAGNijmegen / pathology-whole-slide-data
  A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
  ☆104Updated 8 months ago
• choosehappy / QuPathGeoJSONImportExport
  Coincides with blogpost for using geojson and shapely
  ☆33Updated 4 years ago