amspath / slidescape
☆24Updated last week
Related projects ⓘ
Alternatives and complementary repositories for slidescape
- Whole Slide image (WSI) conversion for brightfield histology images☆33Updated this week
- A Girder plugin for pathology image annotations and analysis.☆57Updated this week
- Pipeline for computational pathology☆34Updated 10 months ago
- TiffSlide - cloud native openslide-python replacement based on tifffile☆85Updated 9 months ago
- Delete the label from a whole-slide image☆58Updated 3 years ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆59Updated 4 months ago
- An open-source digital pathology based rapid image annotation tool☆74Updated this week
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆28Updated 9 months ago
- Python package for reading DICOM WSI file sets.☆34Updated this week
- ☆53Updated last month
- PAthological QUpath Obsession - QuPath and Python conversations☆105Updated 4 months ago
- QuPath extension for Segment Anything Model (SAM)☆92Updated 2 months ago
- Python library for converting WSI files to DICOM☆61Updated 2 weeks ago
- ☆40Updated 2 years ago
- Virtual Alignment of pathoLogy Image Series☆123Updated 3 months ago
- A workflow for redacting PHI from whole slide images (WSI) based on the Digital Slide Archive.☆15Updated last month
- Interactive Segmentation of Nucleus☆61Updated 2 years ago
- ⚡ Open-source software for deep learning-based digital pathology☆122Updated 5 months ago
- 🔬 Code-free deep segmentation for computational pathology☆52Updated 5 months ago
- Re-stained whole slide image alignment☆31Updated last year
- Python 3 library for the augmentation & normalization of H&E images☆51Updated 2 years ago
- Solid Tumor Associative Modeling in Pathology☆47Updated 2 months ago
- Strip potentially identifying label and macro images from Aperio SVS whole slide image files☆26Updated 6 months ago
- iSyntax to raw format converter☆19Updated last year
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆22Updated 2 months ago
- GPU-accelerated stain normalization command line tool☆19Updated last year
- The official deployment of the Digital Slide Archive and HistomicsTK.☆110Updated last week
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆52Updated last year
- ☆12Updated 3 months ago
- PyTorch implementation of 2D and 3D StarDist - Object Detection with Star-convex Shapes☆21Updated last year