hilfikerp / TCIA-Python3-Downloader

Related projects ⓘ

Alternatives and complementary repositories for TCIA-Python3-Downloader

• OpenSaMD / OpenSaMD
  We help you commercialise your open source medical software.
  ☆25Updated last year
• bhklab / med-imagetools
  Transparent and reproducible medical image processing pipelines in Python.
  ☆36Updated this week
• AIM-Harvard / SlicerRadiomics
  A Slicer extension to provide a GUI around pyradiomics
  ☆106Updated 6 months ago
• oncoray / mirp
  Medical Image Radiomics Processor
  ☆53Updated 2 months ago
• zhenweishi / Py-rex
  Open source of Pyradiomics extension
  ☆21Updated 2 years ago
• ImagingDataCommons / IDC-Tutorials
  Self-guided notebook tutorials to help get started with using IDC
  ☆28Updated last week
• DigitalSlideArchive / HistomicsUI
  A Girder plugin for pathology image annotations and analysis.
  ☆57Updated this week
• AIM-Harvard / DeepCAC
  Fully automatic coronary calcium risk assessment using Deep Learning.
  ☆37Updated 3 years ago
• Slicer / SlicerNotebooks
  Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Python
  ☆73Updated 2 years ago
• SarderLab / tf-WSI-dataset-utils
  An optimized pipeline for working with Whole Slide Image (WSI) data in Tensorflow
  ☆15Updated 3 years ago
• DSLituiev / slideslicer
  a toolbox for manipulation of digital pathology slides and annotations
  ☆19Updated 4 years ago
• RSNA / AI-Deep-Learning-Lab-2019
  Data, notebooks, and articles associated with the RSNA AI Deep Learning Lab
  ☆29Updated last year
• CBICA / HistoReg
  Framework for registration of sequential digitized histology slices
  ☆28Updated 2 years ago
• PingjunChen / pyslide
  Digital Pathology Whole Slide Image Analysis Toolbox
  ☆48Updated last year
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆74Updated this week
• nadeemlab / ImPartial
  Interactive deep learning whole-cell segmentation and thresholding using partial annotations
  ☆34Updated 2 weeks ago
• baiwenjia / ukbb_cardiac
  Some code for processing and analysing UK Biobank cardiac MR images.
  ☆154Updated this week
• DigitalSlideArchive / digital_slide_archive
  The official deployment of the Digital Slide Archive and HistomicsTK.
  ☆110Updated last week
• PathologyDataScience / HistomicsML2
  A tool for training machine-learning models with whole-slide imaging datasets
  ☆22Updated 10 months ago
• aisinai / rad-report-annotator
  ☆25Updated 2 years ago
• ysbecca / fwat
  A Fast Whole-slide image Annotation Tool (FWAT) for conducting painless studies requiring annotations on whole-slide images.
  ☆11Updated 6 years ago
• KeremTurgutlu / dicom-contour
  ☆76Updated last year
• raidionics / Raidionics-Slicer
  3D Slicer plugin for automatic segmentation and generation of standardized clinical reports for the most common brain tumors, using MRI v…
  ☆14Updated 9 months ago
• radxtools / collageradiomics
  Python Implementation of the CoLlAGe radiomics descriptor. CoLlAGe captures subtle anisotropic differences in disease pathologies by meas…
  ☆15Updated last year
• kirbyju / TCIA_Notebooks
  Notebooks for working with The Cancer Imaging Archive datasets. Have you written one? Submit a PR!
  ☆91Updated this week
• bgilbert / anonymize-slide
  Delete the label from a whole-slide image
  ☆58Updated 3 years ago
• andreped / NoCodeSeg
  🔬 Code-free deep segmentation for computational pathology
  ☆52Updated 5 months ago
• AICAN-Research / FAST-Pathology
  ⚡ Open-source software for deep learning-based digital pathology
  ☆122Updated 5 months ago
• raidionics / Raidionics
  Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes
  ☆35Updated this week
• kirbyju / tcia_utils
  A package to simplify common tasks one might perform when interacting with The Cancer Imaging Archive (TCIA) via Python.
  ☆15Updated this week