deepathology / fseg
Unsupervised Semantic Segmentation for Pathology
☆12Updated this week
Related projects ⓘ
Alternatives and complementary repositories for fseg
- ☆12Updated last year
- A vision language model for gigapixel whole slide images in histopathology☆27Updated 2 months ago
- Multimodal prototyping for cancer survival prediction - ICML 2024☆55Updated 2 months ago
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆22Updated 2 months ago
- GraphLSurv: A Scalable Survival Prediction Network with Adaptive and Sparse Structure Learning for Histopathological Whole-Slide Images -…☆11Updated last year
- NuInsSeg: A Fully Annotated Dataset for Nuclei Instance Segmentation in H&E-Stained Histological Images☆24Updated 4 months ago
- Code for the im4MEC model described in the paper 'Interpretable deep learning model to predict the molecular classification of endometria…☆35Updated 9 months ago
- A tool for rapidly labeling objects using deep learning feature embedding☆27Updated 3 months ago
- Tools to build deep learning pipelines.☆88Updated last week
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆59Updated 4 months ago
- 🔬 Code-free deep segmentation for computational pathology☆52Updated 5 months ago
- Solid Tumor Associative Modeling in Pathology☆47Updated 2 months ago
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆33Updated 5 months ago
- ☆12Updated 7 months ago
- An open-source digital pathology based rapid image annotation tool☆74Updated this week
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆49Updated 2 weeks ago
- Inference code for HoVer-NeXt☆22Updated 2 months ago
- Hands-on Sessions 1 and 2 at the Building Interpretable AI for Digital Pathology AMLD workshop 2021☆21Updated 3 years ago
- Python 3 library for the augmentation & normalization of H&E images☆51Updated 2 years ago
- Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024☆95Updated 2 months ago
- Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images☆20Updated 4 months ago
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆65Updated 9 months ago
- Pipeline for computational pathology☆34Updated 10 months ago
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆92Updated 2 months ago
- ☆75Updated 6 months ago
- TCGA Pathology Reports in Machine Readable Text☆33Updated 5 months ago
- Strip potentially identifying label and macro images from Aperio SVS whole slide image files☆26Updated 6 months ago
- Whole Slide image (WSI) conversion for brightfield histology images☆33Updated last week
- A code for extracting annotated regions from whole slide images (WSIs) anotated in Aperio Imagescope☆11Updated 4 years ago
- A Python library for deep learning on whole-slide images☆50Updated 3 years ago