单细胞分析的中文pipeline
☆272Apr 5, 2024Updated last year
Alternatives and similar repositories for single_cell_tutorial
Users that are interested in single_cell_tutorial are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.☆857Mar 12, 2026Updated last week
- 生物信息学相关的教程☆72Jan 11, 2024Updated 2 years ago
- 使用表达数据,对候选基因进行特征选择,然后构建诊断/预后模型,并使用SHAP分析特征的贡献策划的怒☆15Oct 16, 2025Updated 5 months ago
- https://www.sc-best-practices.org☆1,170Mar 9, 2026Updated 2 weeks ago
- Machine learning-based integration model with elegant performance☆184Sep 23, 2025Updated 6 months ago
- An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.☆630Mar 11, 2026Updated last week
- Visualize the results of cell-cell communication analysis☆25Jan 21, 2023Updated 3 years ago
- This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Pro…☆89Oct 9, 2024Updated last year
- One-step to Cluster and Visualize Gene Expression Matrix☆360Mar 7, 2026Updated 2 weeks ago
- Machine learning-based integrative analysis develops an immune-derived lncRNA signature for improving clinical outcomes in colorectal can…☆128May 30, 2025Updated 9 months ago
- ☆114Sep 16, 2020Updated 5 years ago
- ☆16Mar 2, 2023Updated 3 years ago
- Codes for the scPLC project☆75Dec 2, 2022Updated 3 years ago
- ☆28Jan 15, 2024Updated 2 years ago
- Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq an…☆1,559Dec 11, 2022Updated 3 years ago
- The official pipeline for flexible and high-performance analysis of DNBelab C Serie single-cell data.☆136Jan 19, 2026Updated 2 months ago
- ☆57Aug 8, 2024Updated last year
- Papers with code for single cell related papers☆304Jan 10, 2026Updated 2 months ago
- A list of scRNA-seq analysis tools☆779Mar 9, 2026Updated 2 weeks ago
- A Systematic and Dynamic Pipeline for Single-Cell RNA Sequencing Analysis☆112Oct 16, 2023Updated 2 years ago
- ☆12Mar 5, 2024Updated 2 years ago
- SPAtial Transcriptomics resource for subCellular and High-throughput platforms☆22Dec 10, 2024Updated last year
- ☆18Oct 13, 2023Updated 2 years ago
- Scissor package☆253May 10, 2024Updated last year
- CellPhoneDB can be used to search for a particular ligand/receptor, or interrogate your own HUMAN single-cell transcriptomics data.☆470Jun 6, 2025Updated 9 months ago
- Assembly and Annotation of the Human Immune Health Atlas☆20Aug 28, 2025Updated 6 months ago
- A number of functions were generated to perform pan-cancer DEG analysis, correlation analysis between gene expression and TMB, MSI, TIME,…☆126Mar 28, 2025Updated 11 months ago
- 抓取网络文章到github issues保存☆180Updated this week
- "Orchestrating Spatial Transcriptomics Analysis with Bioconductor" (OSTA) online book☆109Mar 11, 2026Updated last week
- A Guide to the Analysis of Spatial Transcriptomics☆12Jul 29, 2024Updated last year
- collected resource for scRNA-seq analysis☆66Jul 19, 2023Updated 2 years ago
- R package for two-sample Mendelian randomization using the robust adjusted profile score☆40Oct 31, 2025Updated 4 months ago
- 我与单细胞交响乐🤓☆23Nov 4, 2021Updated 4 years ago
- PhyloForge: Unifying micro and macro evolution with comprehensive genomic signals☆10May 17, 2024Updated last year
- Quantifying metabolism activity at the single-cell resolution☆159Feb 18, 2026Updated last month
- Useful functions to make your scRNA-seq plot more cool!☆379Dec 24, 2025Updated 2 months ago
- Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma☆81Oct 29, 2024Updated last year
- ☆395Nov 23, 2025Updated 4 months ago
- Code repository site for manuscript: Unraveling the Heterogeneity of Tumor-Infiltrating Myeloid Cells in Immune Checkpoint Blockade: A Si…☆12Jun 24, 2023Updated 2 years ago