Starlitnightly / single_cell_tutorialLinks
单细胞分析的中文pipeline
☆247Updated last year
Alternatives and similar repositories for single_cell_tutorial
Users that are interested in single_cell_tutorial are comparing it to the libraries listed below
Sorting:
- Papers with code for single cell related papers☆293Updated 2 years ago
- 抓取网络文章到github issues保存☆168Updated this week
- A toolkit of spatial transcriptomic analysis.☆258Updated 2 months ago
- Analysis of single cell RNA-seq data course☆146Updated 3 years ago
- R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics☆456Updated 2 weeks ago
- A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.☆733Updated this week
- An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.☆556Updated last year
- I redo the ScRNA analysis in the paper of Wang et al 2020, Nat Comm. Here's my modified script for Helen He Zhu github (https://github.co…☆12Updated 4 years ago
- A package to help convert different single-cell data formats to each other☆439Updated last year
- One-step to Cluster and Visualize Gene Expression Matrix☆321Updated this week
- ☆311Updated 6 years ago
- CellPhoneDB can be used to search for a particular ligand/receptor, or interrogate your own HUMAN single-cell transcriptomics data.☆427Updated 3 months ago
- ☆290Updated 6 years ago
- ☆208Updated last year
- IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology.☆254Updated 2 weeks ago
- Useful functions to make your scRNA-seq plot more cool!☆357Updated 3 months ago
- pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which…☆538Updated 2 months ago
- Make TCGA download and prepare easy!☆138Updated last year
- ☆356Updated 4 months ago
- Single cell RNA sequencing analysis course☆221Updated last week
- scripts and notebooks from sanbomics☆440Updated 9 months ago
- Tutorial for scRNA-seq data analysis beginners using R☆214Updated 6 months ago
- ☆283Updated 5 years ago
- A tool for semi-automatic cell type classification☆404Updated this week
- ☆170Updated 11 months ago
- ☆275Updated 10 months ago
- TCR and BCR assembly from RNA-seq data☆324Updated 2 weeks ago
- ☆94Updated 6 years ago
- ☆358Updated 3 years ago
- tools and notes for spatial omics☆314Updated 6 months ago