Alternatives and similar repositories for single_cell_tutorial

Users that are interested in single_cell_tutorial are comparing it to the libraries listed below

• genecell / single-cell-papers-with-code
  Papers with code for single cell related papers
  ☆299Updated 2 years ago
• ixxmu / mp_duty
  抓取网络文章到github issues保存
  ☆178Updated last week
• STOmics / Stereopy
  A toolkit of spatial transcriptomic analysis.
  ☆268Updated last month
• cellgeni / scRNA.seq.course
  Analysis of single cell RNA-seq data course
  ☆159Updated 3 years ago
• junjunlab / ClusterGVis
  One-step to Cluster and Visualize Gene Expression Matrix
  ☆336Updated last month
• jmzeng1314 / tcga_example
  ☆294Updated 6 years ago
• jmzeng1314 / scRNA_smart_seq2
  ☆316Updated 6 years ago
• zhanghao-njmu / SCP
  An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.
  ☆607Updated last month
• jinworks / CellChat
  R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
  ☆509Updated 2 months ago
• cellgeni / sceasy
  A package to help convert different single-cell data formats to each other
  ☆450Updated last year
• IOBR / IOBR
  IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology.
  ☆266Updated 3 weeks ago
• junjunlab / scRNAtoolVis
  Useful functions to make your scRNA-seq plot more cool!
  ☆369Updated this week
• jmzeng1314 / my_WGCNA
  ☆293Updated 6 years ago
• Winnie09 / GPTCelltype
  ☆216Updated last year
• Starlitnightly / omicverse
  A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.
  ☆804Updated last week
• ventolab / CellphoneDB
  CellPhoneDB can be used to search for a particular ligand/receptor, or interrogate your own HUMAN single-cell transcriptomics data.
  ☆452Updated 6 months ago
• ayueme / easyTCGA
  📦R包：Make TCGA download and prepare easy!
  ☆149Updated 3 months ago
• STOmics / SAW
  ☆181Updated last year
• Teichlab / celltypist
  A tool for semi-automatic cell type classification
  ☆440Updated this week
• quadbio / scRNAseq_analysis_vignette
  Tutorial for scRNA-seq data analysis beginners using R
  ☆233Updated 9 months ago
• gao-lab / Guideline-for-Computational-Biology-and-Bioinformatics
  ☆370Updated 7 months ago
• jmzeng1314 / scRNA_10X
  ☆94Updated 6 years ago
• junjunlab / GseaVis
  An implement R package to visualize GSEA results
  ☆202Updated 2 weeks ago
• IanevskiAleksandr / sc-type
  ☆280Updated last year
• Teichlab / cellphonedb
  ☆359Updated 4 years ago
• Lindsey-LCFoong / Analysing-10X-ScRNA-data-Wang-et-al-2020-Nat-Commun-
  I redo the ScRNA analysis in the paper of Wang et al 2020, Nat Comm. Here's my modified script for Helen He Zhu github (https://github.co…
  ☆12Updated 4 years ago
• NBISweden / workshop-scRNAseq
  Single cell RNA sequencing analysis course
  ☆229Updated last month
• hbctraining / scRNA-seq
  ☆592Updated 4 years ago
• liulab-dfci / TRUST4
  TCR and BCR assembly from RNA-seq data
  ☆337Updated this week
• jmzeng1314 / 5years
  ☆250Updated 6 years ago