Alternatives and similar repositories for mp_duty:

Users that are interested in mp_duty are comparing it to the libraries listed below

• junjunlab / GseaVis
  An implement R package to visualize GSEA results
  ☆144Updated 2 weeks ago
• czbiohub-sf / scell_lung_adenocarcinoma
  This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset
  ☆145Updated 4 years ago
• navinlabcode / copykat
  ☆220Updated 7 months ago
• jmzeng1314 / scRNA_10X
  ☆92Updated 5 years ago
• Starlitnightly / single_cell_tutorial
  单细胞分析的中文pipeline
  ☆184Updated 9 months ago
• junjunlab / scRNAtoolVis
  Useful functions to make your scRNA-seq plot more cool!
  ☆309Updated last week
• dviraran / SingleR
  SingleR: Single-cell RNA-seq cell types Recognition (legacy version)
  ☆281Updated 4 years ago
• cellgeni / scRNA.seq.course
  Analysis of single cell RNA-seq data course
  ☆126Updated 2 years ago
• sunduanchen / Scissor
  Scissor package
  ☆204Updated 8 months ago
• junjunlab / ClusterGVis
  One-step to Cluster and Visualize Gene Expression Matrix
  ☆270Updated last week
• basilkhuder / Seurat-to-RNA-Velocity
  A guide to using a Seurat object in conjunction with RNA Velocity
  ☆136Updated 3 years ago
• IOBR / IOBR
  IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology.
  ☆222Updated 3 weeks ago
• genecell / single-cell-papers-with-code
  Papers with code for single cell related papers
  ☆275Updated last year
• samuel-marsh / scCustomize
  R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
  ☆237Updated last week
• wu-yc / scMetabolism
  Quantifying metabolism activity at the single-cell resolution
  ☆125Updated 5 months ago
• aertslab / SCENICprotocol
  A scalable SCENIC workflow for single-cell gene regulatory network analysis
  ☆149Updated 2 years ago
• JiekaiLab / scDIOR
  scDIOR: Single cell data IO softwaRe
  ☆139Updated 2 years ago
• cortes-ciriano-lab / SComatic
  A tool for detecting somatic variants in single cell data
  ☆183Updated 4 months ago
• IanevskiAleksandr / sc-type
  ☆250Updated 2 months ago
• xjsun1221 / tinyarray
  plots function for array
  ☆91Updated 7 months ago
• Dragonmasterx87 / Interactive-3D-Plotting-in-Seurat-3.0.0
  This repository contains R code, with which you can create 3D UMAP and tSNE plots of Seurat analyzed scRNAseq data
  ☆121Updated last year
• STOmics / SAW
  ☆151Updated 4 months ago
• jmzeng1314 / AnnoProbe
  ☆102Updated 2 years ago
• tanlabcode / spatial-bonemarrow-atlas
  This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Pro…
  ☆73Updated 3 months ago
• ZJUFanLab / scCATCH
  Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data
  ☆221Updated last year
• neurorestore / Libra
  ☆159Updated 5 months ago
• Sijin-ZhangLab / PanMyeloid
  ☆96Updated 4 years ago
• quadbio / scRNAseq_analysis_vignette
  Tutorial for scRNA-seq data analysis beginners using R
  ☆172Updated 9 months ago
• SingleR-inc / SingleR
  Clone of the Bioconductor repository for the SingleR package.
  ☆182Updated 3 weeks ago
• constantAmateur / SoupX
  R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data
  ☆263Updated 2 years ago