ixxmu / mp_duty

Related projects ⓘ

Alternatives and complementary repositories for mp_duty

• czbiohub-sf / scell_lung_adenocarcinoma
  This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset
  ☆143Updated 3 years ago
• junjunlab / GseaVis
  An implement R package to visualize GSEA results
  ☆131Updated this week
• jmzeng1314 / scRNA_10X
  ☆91Updated 5 years ago
• JarningGau / ProjectSVR
  A package for reference mapping and nice visualization
  ☆19Updated 6 months ago
• junjunlab / ClusterGVis
  One-step to Cluster and Visualize Gene Expression Matrix
  ☆240Updated this week
• navinlabcode / copykat
  ☆207Updated 4 months ago
• jmzeng1314 / AnnoProbe
  ☆100Updated last year
• WeiSong-bio / jmzeng1314-5years-summarize
  ☆116Updated 5 years ago
• xjsun1221 / tinyarray
  plots function for array
  ☆88Updated 4 months ago
• ZJUFanLab / scCATCH
  Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data
  ☆217Updated last year
• junjunlab / scRNAtoolVis
  Useful functions to make your scRNA-seq plot more cool!
  ☆280Updated this week
• Dragonlongzhilin / RenalTumor
  Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma
  ☆75Updated last week
• Starlitnightly / single_cell_tutorial
  单细胞分析的中文pipeline
  ☆163Updated 7 months ago
• basilkhuder / Seurat-to-RNA-Velocity
  A guide to using a Seurat object in conjunction with RNA Velocity
  ☆131Updated 2 years ago
• neurorestore / Libra
  ☆150Updated 2 months ago
• Danko-Lab / BayesPrism
  A Fully Bayesian Inference of Tumor Microenvironment composition and gene expression
  ☆153Updated 3 weeks ago
• dviraran / SingleR
  SingleR: Single-cell RNA-seq cell types Recognition (legacy version)
  ☆273Updated 4 years ago
• IOBR / IOBR
  IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology.
  ☆199Updated last week
• SingleR-inc / SingleR
  Clone of the Bioconductor repository for the SingleR package.
  ☆176Updated last week
• hbctraining / Intro-to-ChIPseq-flipped
  ☆79Updated 4 months ago
• singleron-RD / CeleScope
  Single Cell Analysis Pipelines
  ☆91Updated last month
• sunduanchen / Scissor
  Scissor package
  ☆182Updated 5 months ago
• quadbio / scRNAseq_analysis_vignette
  Tutorial for scRNA-seq data analysis beginners using R
  ☆151Updated 6 months ago
• samuel-marsh / scCustomize
  R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
  ☆214Updated this week
• chuiqin / irGSEA
  The integration of single cell rank-based gene set enrichment analysis
  ☆112Updated 3 months ago
• Dragonmasterx87 / Interactive-3D-Plotting-in-Seurat-3.0.0
  This repository contains R code, with which you can create 3D UMAP and tSNE plots of Seurat analyzed scRNAseq data
  ☆116Updated last year
• genecell / single-cell-papers-with-code
  Papers with code for single cell related papers
  ☆271Updated last year
• Sijin-ZhangLab / PanMyeloid
  ☆89Updated 4 years ago
• cortes-ciriano-lab / SComatic
  A tool for detecting somatic variants in single cell data
  ☆167Updated last month
• IanevskiAleksandr / sc-type
  ☆237Updated 7 months ago