Neurally-derived Potts models for protein design, inspired by dTERMen
☆16Aug 23, 2022Updated 4 years ago
Alternatives and similar repositories for terminator_public
Users that are interested in terminator_public are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An open source version of EVQLV's HyperBindAI, a contrastive learning model for Ab-Ag interactivity.☆12Jun 11, 2025Updated last year
- Tutorial files☆12Aug 7, 2024Updated 2 years ago
- ☆25Sep 25, 2026Updated last month
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated 2 years ago
- Bayesian Optimization with Pretrained Protein Sequence Models☆56Jul 27, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"☆18Mar 16, 2025Updated last year
- protein backbone refinement☆16Sep 12, 2024Updated 2 years ago
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆28Aug 9, 2023Updated 3 years ago
- ☆12Jun 4, 2025Updated last year
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆90Jul 2, 2025Updated last year
- Official code release for Ambient Protein Diffusion☆35Aug 30, 2025Updated last year
- Code for running PottsMPNN to generate sequences and predict energies☆47Oct 30, 2026Updated last week
- A lightweight library for loading and manipulating biomolecular structures☆25Aug 8, 2026Updated 2 months ago
- protein docking stuff☆58Apr 2, 2026Updated 7 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Metrics for assessing 3D molecular structures.☆11May 9, 2026Updated 5 months ago
- Command-line Python package for metal-coordination mining and discovery of radical halogenases from AlphaFold2 structural models. Include…☆13Apr 24, 2026Updated 6 months ago
- Fast protein structure searching or your money back☆119Apr 13, 2026Updated 6 months ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Oct 27, 2021Updated 5 years ago
- HBDesigner is an algorithm that designs highly-connected hydrogen bonding networks that fit the requested design constraints onto an inpu…☆23Oct 26, 2026Updated last week
- Metrics to evaluate distributional coverage of generative models of protein structures.☆22Aug 13, 2025Updated last year
- MEGADOCK on Google Colaboratory☆20Oct 2, 2023Updated 3 years ago
- The software system of improving AlphaFold2- and AlphaFold-Multimer-based protein tertiary & quaternary structure prediction. It was deve…☆33Dec 14, 2023Updated 2 years ago
- PeptoneBench: evaluating protein ensembles across the order-disorder continuum☆22Mar 24, 2026Updated 7 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Compressing protein structures effectively with torsion angles☆199Sep 7, 2026Updated last month
- ☆25Aug 6, 2026Updated 3 months ago
- Code for our paper "Protein sequence design with a learned potential"☆34Aug 5, 2021Updated 5 years ago
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Nov 14, 2025Updated 11 months ago
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆39Jul 28, 2022Updated 4 years ago
- Code for our paper "Protein sequence design with a learned potential"☆81Sep 8, 2023Updated 3 years ago
- A tool suite for designing massive protein assmeblies☆12Jun 21, 2022Updated 4 years ago
- This repository gathers the SchNet4AIM code along with some instructions and readme files.☆15Mar 13, 2024Updated 2 years ago
- ☆10Nov 22, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- random colab notebooks for biology☆25Aug 23, 2025Updated last year
- ⛓️ RGI-Toolkit: Restraint-Guided-Inference toolkit, Differentiable Restraints for Controllable Biomolecular Structure Prediction☆15Updated this week
- ☆121Dec 7, 2022Updated 3 years ago
- Aligned Diffusion Schroedinger Bridges (UAI 2023)☆14Sep 18, 2025Updated last year
- Modelling of Large Protein Complexes☆39Aug 8, 2025Updated last year
- Rotamer Interaction Field Python Libraries for Computational Protein Design☆14Feb 2, 2018Updated 8 years ago
- GREMLIN is a method to learn a statistical model of a protein family that captures both conservation and co-evolution patterns in the fam…☆26Jul 3, 2016Updated 10 years ago