Fast DNA manipulation for Rust and Python
☆65Mar 10, 2026Updated 2 months ago
Alternatives and similar repositories for quickdna
Users that are interested in quickdna are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Data files for the molecular modelling course☆13Jan 26, 2024Updated 2 years ago
- R scripts used for MYC analyses☆10Jan 30, 2018Updated 8 years ago
- SecureDNA client and server components monorepo☆20Oct 20, 2025Updated 7 months ago
- ☆13Sep 11, 2024Updated last year
- A simple BLOSUM module for python3☆18Nov 21, 2025Updated 6 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments.☆41Mar 24, 2026Updated 2 months ago
- ☆13Oct 7, 2024Updated last year
- A port of biocommons/hgvs to the Rust programming language☆18May 11, 2026Updated last week
- Developer calls agendas and transcripts☆12Apr 15, 2023Updated 3 years ago
- process any file in tabular format. Fasta/fastq/GTF/GFF/VCF/SAM/BED☆23Aug 22, 2025Updated 9 months ago
- a DNA assembly library☆23Aug 13, 2025Updated 9 months ago
- The collection of code used to teach and created during my programming classes at Learn Beyond the Book! (learnbeyondthebook.com)☆22Feb 22, 2019Updated 7 years ago
- A Python interface to gb-io, a fast GenBank parser written in Rust.☆24Apr 23, 2026Updated last month
- Wallet server for the RGB protocol (that is defined by LNP/BP)☆16Sep 28, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆11Jan 19, 2024Updated 2 years ago
- Host depletion optimised for clinical metagenomic sequencing applications☆18Updated this week
- SNP and indel calls from multiple sequence alignment (MSA)☆13Nov 11, 2022Updated 3 years ago
- Tree-automata-based run-time type constraints for miniKanren☆14Aug 3, 2023Updated 2 years ago
- A wrapper to Heng Li's kseq/readfq, an efficient FastQ/Fasta parser☆15Jun 28, 2023Updated 2 years ago
- non-redundant, compressed, journalled, file-based storage for biological sequences☆50Nov 10, 2025Updated 6 months ago
- A tiny programming system inspired by Boxer leveraging the HTML DOM structure. Illustrates naive realism, explicit structure and evaluati…☆25May 28, 2025Updated 11 months ago
- Fast FASTX parsing and k-mer methods in Rust☆211Apr 20, 2026Updated last month
- My MacOS, Ubuntu, Arch Linux, Windows and WSL dotfiles with a custom installer and various helpers☆37Jan 31, 2026Updated 3 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Type Inference Prototyping Engine from Relational specifications of type systems☆11Jun 24, 2020Updated 5 years ago
- microKanren sagittarius/larceny☆11Jun 13, 2015Updated 10 years ago
- Build and deploy cross platform bioinformatic utilities with Rust.☆19Apr 1, 2025Updated last year
- Deep learning-based language model for glycan sequences☆17Jan 17, 2020Updated 6 years ago
- ☆12Jun 7, 2024Updated last year
- Cur dependently-typed language in miniKanren.☆17Jan 26, 2018Updated 8 years ago
- Relational implementation of the CESK machine☆21Jul 15, 2013Updated 12 years ago
- Hybrid method based on a variable-order de bruijn Graph for the error Correction of Long Reads☆11Jan 20, 2021Updated 5 years ago
- ☆13Mar 2, 2015Updated 11 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Python package for common tasks in bioinformatic.☆12Sep 24, 2025Updated 8 months ago
- PyO3 bindings and Python interface to skani, a method for fast genomic identity calculation using sparse chaining.☆29Aug 20, 2025Updated 9 months ago
- Repository for "Nearest neighbor search on embeddings rapidly identifies distant protein relations"☆13Apr 2, 2023Updated 3 years ago
- Serverless Datalake architecture☆16Apr 6, 2026Updated last month
- This sample repositories provides an production ready example of enhancing AWS SSO for enterprise usage. We provide an automation for ass…☆16Jul 8, 2025Updated 10 months ago
- My personal website built by Quarto.☆14Apr 30, 2025Updated last year
- Stochastic Logic Programs (SLP) style probabilistic logic programming in miniKanren☆34Feb 3, 2013Updated 13 years ago