SSDL-SNU / SNUPILinks
SNUPI (Structured NUcleic-acids Programming Interface)
☆14Updated 9 months ago
Alternatives and similar repositories for SNUPI
Users that are interested in SNUPI are comparing it to the libraries listed below
Sorting:
- A GUI for automated sequence design of wireframe scaffolded DNA origami☆14Updated 4 years ago
- Python interface for RCSB.org API services☆54Updated last week
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆98Updated 2 years ago
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆96Updated 5 months ago
- PyMOL-wasm port's binary and html/javascript code☆33Updated 2 months ago
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆166Updated last month
- Create DSSP and HSSP files☆94Updated last year
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆49Updated last year
- ☆46Updated 7 months ago
- AlphaFold-initiated replica exchange protein docking☆85Updated 5 months ago
- oxView: Visualization and editing tool for DNA/RNA nanotechnology and oxDNA/oxRNA configuration analysis☆53Updated this week
- Sandbox for Deep-Learning based Computational Protein Design☆117Updated this week
- Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation☆133Updated 2 years ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆70Updated last year
- This repository includes the slides and the practicals for the course of Structural Bioinformatics of the MBB/QB degrees at the Universit…☆87Updated last week
- CHAPERONg: An automated pipeline for GROMACS MD simulations and trajectory analyses☆54Updated 3 months ago
- Tutorials, cheat sheets, and other resources for computational methods for protein design.☆123Updated 2 years ago
- Python interface for the RCSB PDB search API.☆65Updated 8 months ago
- Protein folding in Pymol☆127Updated last week
- code for IDR binding paper 2025☆61Updated 9 months ago
- Software for biomolecular electrostatics and solvation calculations☆116Updated last year
- Source code and examples for AlphaFold Unmasked☆75Updated 2 months ago
- A set of tools to analyze oxDNA/oxRNA simulations of DNA/RNA☆20Updated 3 years ago
- Framework for the rapid modeling glycans and glycoproteins.☆31Updated 2 years ago
- Python implementation of the Ramachandran plot☆53Updated 4 months ago
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆100Updated 2 months ago
- Slides + Iframe = sliFrame☆55Updated 7 months ago
- EnzyHTP is a python library that automates the complete life-cycle of enzyme modeling☆29Updated last week
- A model-context-protocol server for molecules.☆84Updated 7 months ago
- Structure prediction of alternative protein conformations☆80Updated 9 months ago