SSDL-SNU / SNUPILinks
SNUPI (Structured NUcleic-acids Programming Interface)
☆15Updated 11 months ago
Alternatives and similar repositories for SNUPI
Users that are interested in SNUPI are comparing it to the libraries listed below
Sorting:
- A GUI for automated sequence design of wireframe scaffolded DNA origami☆14Updated 4 years ago
- Python scripting library for generating designs readable by scadnano.☆16Updated last week
- A set of tools to analyze oxDNA/oxRNA simulations of DNA/RNA☆20Updated 3 years ago
- Python interface for RCSB.org API services☆58Updated 2 months ago
- oxView: Visualization and editing tool for DNA/RNA nanotechnology and oxDNA/oxRNA configuration analysis☆54Updated 3 weeks ago
- AlphaFold-initiated replica exchange protein docking☆87Updated 8 months ago
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆198Updated last month
- ☆236Updated last week
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆98Updated 2 years ago
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆97Updated 8 months ago
- A collection of tools for DNA modelling☆23Updated 6 months ago
- ☆76Updated 8 months ago
- Fast indexing and search of discontinuous motifs in protein structures☆113Updated last week
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆120Updated 2 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Updated last year
- A model-context-protocol server for molecules.☆88Updated 9 months ago
- ☆146Updated 6 months ago
- Official repository for the ProteinDJ protein design pipeline☆87Updated 3 weeks ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆114Updated 3 months ago
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆175Updated 4 months ago
- Python3 translation of AutoDockTools☆132Updated last year
- Official repo of the modular BioExcel version of HADDOCK☆221Updated last week
- Software for biomolecular electrostatics and solvation calculations☆125Updated last year
- Protein folding in Pymol☆138Updated 2 months ago
- our in-house version of ProteinMPNN☆31Updated 5 months ago
- Slides + Iframe = sliFrame☆55Updated 10 months ago
- PINDER: The Protein INteraction Dataset and Evaluation Resource☆148Updated last year
- Protein Structure Analysis☆63Updated 4 months ago
- ☆62Updated 3 years ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆116Updated 3 months ago