lorenzo-rovigatti / tacoxDNALinks
A collection of tools for DNA modelling
☆22Updated 2 months ago
Alternatives and similar repositories for tacoxDNA
Users that are interested in tacoxDNA are comparing it to the libraries listed below
Sorting:
- ☆74Updated 2 weeks ago
- Input files for GROMACS tutorials written for the Journal of Physical Chemistry B☆23Updated last year
- CHAPERONg: An automated pipeline for GROMACS MD simulations and trajectory analyses☆52Updated 2 months ago
- EnzyHTP is a python library that automates the complete life-cycle of enzyme modeling☆29Updated this week
- Material from papers from KULL centre☆71Updated last year
- pyCHARMM tutorial, documentation and examples. This repository contains materials originally from the pyCHARMM Workshop run at the Univer…☆71Updated 3 weeks ago
- ☆45Updated this week
- ☆57Updated 2 years ago
- ☆18Updated 6 months ago
- ☆63Updated last week
- Software for biomolecular electrostatics and solvation calculations☆114Updated last year
- PENSA - a collection of python methods for exploratory analysis and comparison of biomolecular conformational ensembles.☆144Updated 8 months ago
- ☆69Updated last year
- Modelling of Large Protein Complexes☆37Updated 2 months ago
- ☆34Updated last year
- Modeling with limited data☆59Updated 3 months ago
- Automatic gromacs protocol from preparation to production with ligand parametrization through☆74Updated 6 months ago
- MM-PBSA method for GROMACS. For full description, please visit homepage:☆67Updated 5 months ago
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆97Updated 2 years ago
- Simple protein-ligand complex simulation with OpenMM☆90Updated 2 years ago
- INSert membrANE - A simple, versatile tool for building coarse-grained simulation systems☆68Updated last year
- Gaussian Accelerated Molecular Dynamics (GaMD) is a computational method for both unconstrained enhanced sampling and free energy calcula…☆86Updated 3 months ago
- Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation☆132Updated 2 years ago
- Tool suite for analysing molecular dynamics trajectories using network analysis and PRS☆51Updated 5 months ago
- A Consensus Docking Plugin for PyMOL☆76Updated last year
- A new version of the code to simulate the oxDNA/oxRNA models, now equipped with Python bindings☆61Updated last week
- Trusted force field files for gromacs☆61Updated last year
- ☆46Updated 6 months ago
- A python toolkit for analysing membrane protein-lipid interactions.☆68Updated last week
- Slides + Iframe = sliFrame☆55Updated 6 months ago