Niopek-Lab / ProDominoLinks
☆22Updated last year
Alternatives and similar repositories for ProDomino
Users that are interested in ProDomino are comparing it to the libraries listed below
Sorting:
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆61Updated 3 weeks ago
- ☆43Updated 10 months ago
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆19Updated last year
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆77Updated last month
- ☆30Updated 3 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆70Updated 6 months ago
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆118Updated 2 months ago
- Extension of ThermoMPNN for double mutant predictions☆53Updated 3 months ago
- ☆65Updated 3 months ago
- Making Protein folding accessible to all!☆25Updated 2 years ago
- A bunch of shell utilities for dealing the silent files☆75Updated 3 weeks ago
- ☆25Updated 11 months ago
- All-Atom (Including Hydrogen!) Ligand-Conditioned Protein Sequence Design & Sidechain Packing GNN☆27Updated 2 weeks ago
- Small_molecule_binder_design_use_pseudocycles☆23Updated last year
- code for IDR binding paper 2025☆66Updated 11 months ago
- A command-line interface and Python library for generating AlphaFold3 input files.☆38Updated 3 weeks ago
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆87Updated 3 months ago
- ☆53Updated 7 months ago
- ☆54Updated 2 months ago
- Code release for "Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding"☆45Updated 5 months ago
- ☆16Updated 3 years ago
- ☆84Updated 2 months ago
- ☆94Updated 3 months ago
- bakerlab pymol scripts☆26Updated 5 years ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆36Updated 2 months ago
- Analysis of alphafold and colabfold results☆33Updated last month
- Utility for building inverse rotamer assemblies out of a Rosetta matcher/enzdes constraint file.☆26Updated 10 months ago
- Kuhlman Lab Installation of AlphaFold3☆38Updated 4 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆91Updated last month
- Fast protein backbone flexibility prediction model☆34Updated 3 weeks ago