Python scripting library for generating designs readable by scadnano.
☆18Aug 26, 2026Updated 2 months ago
Alternatives and similar repositories for scadnano-python-package
Users that are interested in scadnano-python-package are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Web application for designing DNA structures such as DNA origami.☆39Updated this week
- Designer scaffolded DNA DX-based wireframe lattices☆14Jul 28, 2018Updated 8 years ago
- Nucleic acid sequence designer☆12Sep 10, 2026Updated last month
- Python tool for auto-breaking DNA origami staples☆17Jul 24, 2026Updated 3 months ago
- This is a Python implementation of the sequence design algorithm DAEDALUS for scaffolded DNA origami☆20May 11, 2026Updated 5 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A collection of tools for DNA modelling☆26Jun 4, 2026Updated 4 months ago
- SNUPI (Structured NUcleic-acids Programming Interface)☆18Feb 19, 2025Updated last year
- Computational analysis of nucleic acids structures using graph neural networks☆16Mar 25, 2024Updated 2 years ago
- oxView: Visualization and editing tool for DNA/RNA nanotechnology and oxDNA/oxRNA configuration analysis☆61Jul 10, 2026Updated 3 months ago
- DNA origami design tool☆41Jan 18, 2024Updated 2 years ago
- QSLib is a package for interacting with Applied Biosystems' QuantStudio qPCR machines, intended for non-qPCR uses, such as DNA computing …☆15Updated this week
- A set of tools to analyze oxDNA/oxRNA simulations of DNA/RNA☆21Jul 7, 2022Updated 4 years ago
- A GUI for automated sequence design of wireframe scaffolded DNA origami☆14Nov 3, 2021Updated 4 years ago
- Repository of the data for PLUMED Masterclass 22.3☆15Jul 10, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- The standalone code to simulate the oxDNA/oxRNA models, now equipped with Python bindings and the oxDNA_analysis_tools suite☆77Oct 2, 2026Updated 3 weeks ago
- Here we give programs that check if Turing machines halt or not.☆17Sep 1, 2025Updated last year
- Automation of computational chemistry tasks using GAMESS, Orca, PSI4 and Gaussian. Gamess tasks emphasise the use of FMO calculations.☆27Apr 27, 2025Updated last year
- ENSnano, a 3D graphical application for DNA nanostructures.☆52Dec 15, 2023Updated 2 years ago
- Supporting information for predicting and engineering post-translational modifcations using Rosetta☆10Feb 13, 2024Updated 2 years ago
- Rank binders by structure modeling☆11Apr 10, 2026Updated 6 months ago
- General Board Game Playing☆25Jun 16, 2025Updated last year
- Design platform for creating single-chain polyhedral cages made from coiled-coil building modules☆25Oct 12, 2017Updated 9 years ago
- Python image tiling library for image processing, object detection, etc.☆12Jul 25, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Parallel Sequitur Project☆14Dec 14, 2012Updated 13 years ago
- Structural biology superpowers for AI coding agents: PyMOL, ChimeraX, AlphaFold DB, RCSB PDB, UniProt, and Rosetta workflows.☆10Jul 17, 2026Updated 3 months ago
- ☆10Sep 29, 2022Updated 4 years ago
- Cadnano2☆62Sep 23, 2026Updated last month
- DNA-D2S: a systematic error simulation Model for DNA Data Storage channel☆12Feb 14, 2022Updated 4 years ago
- A Prot paper related materials☆11Sep 5, 2022Updated 4 years ago
- UV-first benchmark for protein-ligand docking with reproducible annotation, pocket similarity, and HPC workflows.☆13Mar 4, 2026Updated 7 months ago
- Generative diverse protein backbones by protein language model☆35Feb 27, 2026Updated 8 months ago
- An AFM image analysis program to batch process data and obtain statistics from images☆82Oct 23, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Code for the paper LazImpa: Lazy and Impatient neural agents learn to communicate efficiently. Mathieu Rita, Rahma Chaabouni and Emmanuel…☆17Nov 21, 2020Updated 5 years ago
- Python module for analysis of behavorial data☆14Sep 4, 2026Updated last month
- ☆11Oct 22, 2026Updated last week
- pains filter using rdktit☆11Mar 17, 2015Updated 11 years ago
- DNA-based End-to-End Encrypted EFS Database created using Python 🧬☆10Dec 21, 2023Updated 2 years ago
- Document binarization using deep learning☆10Dec 31, 2020Updated 5 years ago
- SpectraFox is a free tool for managing, processing, and evaluating scientific scanning probe microscopy (SPM) data-files. For example, da…☆16Oct 18, 2023Updated 3 years ago