Python scripting library for generating designs readable by scadnano.
☆17Apr 3, 2026Updated 2 months ago
Alternatives and similar repositories for scadnano-python-package
Users that are interested in scadnano-python-package are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Web application for designing DNA structures such as DNA origami.☆34May 28, 2026Updated 2 weeks ago
- Designer scaffolded DNA DX-based wireframe lattices☆14Jul 28, 2018Updated 7 years ago
- This is a Python implementation of the sequence design algorithm DAEDALUS for scaffolded DNA origami☆19May 11, 2026Updated last month
- Python tool for auto-breaking DNA origami staples☆16Jan 4, 2026Updated 5 months ago
- SNUPI (Structured NUcleic-acids Programming Interface)☆15Feb 19, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A set of tools to analyze oxDNA/oxRNA simulations of DNA/RNA☆21Jul 7, 2022Updated 3 years ago
- A collection of tools for DNA modelling☆25Jun 4, 2026Updated last week
- DNA origami design tool☆39Jan 18, 2024Updated 2 years ago
- oxView: Visualization and editing tool for DNA/RNA nanotechnology and oxDNA/oxRNA configuration analysis☆56May 6, 2026Updated last month
- A GUI for automated sequence design of wireframe scaffolded DNA origami☆14Nov 3, 2021Updated 4 years ago
- ☆12Mar 18, 2020Updated 6 years ago
- Here we give programs that check if Turing machines halt or not.☆16Sep 1, 2025Updated 9 months ago
- ENSnano, a 3D graphical application for DNA nanostructures.☆53Dec 15, 2023Updated 2 years ago
- The standalone code to simulate the oxDNA/oxRNA models, now equipped with Python bindings and the oxDNA_analysis_tools suite☆68Jun 1, 2026Updated last week
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- A Prot paper related materials☆11Sep 5, 2022Updated 3 years ago
- Cadnano2☆61Feb 12, 2025Updated last year
- Python module for analysis of behavorial data☆14Mar 11, 2026Updated 3 months ago
- dynamic classing for jupyter notebooks☆13Sep 18, 2020Updated 5 years ago
- ☆10Sep 29, 2022Updated 3 years ago
- pains filter using rdktit☆11Mar 17, 2015Updated 11 years ago
- DNA-D2S: a systematic error simulation Model for DNA Data Storage channel☆12Feb 14, 2022Updated 4 years ago
- An AFM image analysis program to batch process data and obtain statistics from images☆76Updated this week
- Code for the paper LazImpa: Lazy and Impatient neural agents learn to communicate efficiently. Mathieu Rita, Rahma Chaabouni and Emmanuel…☆17Nov 21, 2020Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- SPIDER-WEB generates coding algorithms with superior error tolerance and real-time information retrieval capacity☆11Jun 21, 2024Updated last year
- MSSR Plugin☆14Oct 30, 2024Updated last year
- VLC remote control interface for emacs☆12Sep 12, 2019Updated 6 years ago
- Process BindingDB☆10Nov 19, 2015Updated 10 years ago
- SpectraFox is a free tool for managing, processing, and evaluating scientific scanning probe microscopy (SPM) data-files. For example, da…☆16Oct 18, 2023Updated 2 years ago
- Output gemini formatted documents from org-mode☆13Mar 13, 2024Updated 2 years ago
- Jupyter Notebooks for Python Introduction, University of Basel, May 2020☆14May 15, 2020Updated 6 years ago
- Document binarization using deep learning☆10Dec 31, 2020Updated 5 years ago
- Generate usage documentation in Markdown format from Python scripts using argparse☆17Apr 13, 2026Updated last month
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- DNA-based End-to-End Encrypted EFS Database created using Python 🧬☆10Dec 21, 2023Updated 2 years ago
- calculating RMSD between 2 conformers with different atom names☆14Jan 13, 2021Updated 5 years ago
- Repository of the data for PLUMED Masterclass 22.3☆14Jul 10, 2024Updated last year
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆15Jul 25, 2023Updated 2 years ago
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆16Sep 10, 2024Updated last year
- alphafold FAPE loss☆10Sep 28, 2021Updated 4 years ago
- ☆15Apr 13, 2025Updated last year