RuishanLiu / precision-cancer
☆13Updated 2 years ago
Alternatives and similar repositories for precision-cancer:
Users that are interested in precision-cancer are comparing it to the libraries listed below
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆58Updated 3 weeks ago
- Knowledge-primed neural networks☆35Updated 2 years ago
- ☆14Updated 2 years ago
- A deep-learning framework for multi-omics integration☆25Updated last year
- code for Gogleva et al manuscript☆45Updated 2 years ago
- ☆10Updated 3 years ago
- BulkRNABert: Cancer prognosis from bulk RNA-seq based language models☆20Updated 8 months ago
- ☆22Updated 2 months ago
- A resource of adverse drug effects extracted from FDA structured product labels☆70Updated last month
- ISMB 2020: Improved survival analysis by learning shared genomic information from pan-cancer data☆17Updated 4 years ago
- ☆19Updated 4 years ago
- PlaNet: Predicting population response to drugs via clinical knowledge graph☆23Updated 2 weeks ago
- ☆61Updated 3 years ago
- CMap Notebooks for LINCS 2020 Workshop☆46Updated 3 years ago
- Integrate Any Omics: Towards genome-wide data integration for patient stratification☆45Updated 2 weeks ago
- Cancer Drug Response prediction using a Recommender System☆41Updated last year
- a package for streamlined multidomain data integration and translation based on cross-modal autoencoders architectures☆28Updated last year
- Python package to load and query ARCHS4 data☆19Updated 2 weeks ago
- Framework for Interpretable Neural Networks☆101Updated this week
- ☆9Updated 5 months ago
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆54Updated 4 years ago
- Biological Network Integration using Convolutions☆62Updated last year
- ☆13Updated last month
- ☆23Updated 3 weeks ago
- MASI Lab Implementation of PheWAS in Python☆28Updated 4 months ago
- Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors☆39Updated 10 months ago
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆49Updated 3 years ago
- Agent self-driven repository on bio-agent papers, i.e. papers on LLM-based agents in biology and medicine.☆29Updated this week
- insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…☆25Updated 8 years ago
- scPretrain: Multi-task self-supervised learning for cell type classification☆23Updated 3 years ago