Alternatives and similar repositories for TrialPathfinder

Users that are interested in TrialPathfinder are comparing it to the libraries listed below

• RyanWangZf / PyTrial
  PyTrial: A Comprehensive Platform for Artificial Intelligence for Drug Development
  ☆110Updated last year
• ruoqi-liu / DeepIPW
  Code for paper "A deep learning framework for drug repurposing via emulating clinical trials on real world patient data" (Accepted to Nat…
  ☆98Updated 3 years ago
• mims-harvard / ClinVec
  ClinVec: Unified Embeddings of Clinical Codes Enable Knowledge-Grounded AI in Medicine
  ☆67Updated 2 weeks ago
• MASILab / pyPheWAS
  MASI Lab Implementation of PheWAS in Python
  ☆28Updated 9 months ago
• RuishanLiu / precision-cancer
  ☆15Updated 2 years ago
• futianfan / clinical-trial-outcome-prediction
  benchmark dataset and Deep learning method (Hierarchical Interaction Network, HINT) for clinical trial approval probability prediction, p…
  ☆125Updated 2 months ago
• HPIMS / phe2vec
  Phe2vec: Automated Disease Phenotyping based on Unsupervised Embeddings from Electronic Health Records
  ☆24Updated 4 years ago
• tatonetti-lab / onsides
  A resource of adverse drug effects extracted from FDA structured product labels
  ☆81Updated 2 months ago
• mims-harvard / SHEPHERD
  SHEPHERD: Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases
  ☆70Updated last month
• CogStack / Foresight
  Deep Generative Modelling of Patient Timelines using Electronic Health Records
  ☆63Updated 2 months ago
• OHDSI / Criteria2Query
  [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…
  ☆69Updated this week
• landiisotta / convae_architecture
  ☆41Updated 3 years ago
• jvfe / pytrials
  Python package that wraps around the ClinicalTrials.gov API
  ☆56Updated last year
• theislab / ehrapy
  Electronic Health Record Analysis with Python.
  ☆302Updated last week
• metapub / metapub
  Python toolkit for NCBI metadata (via eutils) and pubmed article text mining -- official primary repo.
  ☆122Updated last week
• I2C9W / fromtexttotables
  Leveraging
  ☆13Updated last year
• clinicalml / omop-learn
  Python package for machine learning for healthcare using a OMOP common data model
  ☆110Updated 2 years ago
• ZhiGroup / pytorch_ehr
  source codes based on PyTorch to analyze EHR
  ☆145Updated last year
• dfci / matchengine-V2
  Open source engine for matching cancer patients to precision medicine clinical trials (V2).
  ☆38Updated last year
• MaayanLab / HarmonizomePythonScripts
  ☆25Updated 3 months ago
• spiros / chronological-map-phenotypes
  Machine-readable version of electronic health record phenotypes for Kuan V. and Denaxas S. et al.
  ☆49Updated last year
• dhimmel / drugbank
  User-friendly extensions of the DrugBank database
  ☆188Updated 6 years ago
• snap-stanford / planet
  PlaNet: Predicting population response to drugs via clinical knowledge graph
  ☆32Updated 5 months ago
• BrunakSanderLabs / CancerRiskNet
  ☆69Updated last year
• ltscomputingllc / faersdbstats
  Generate safety signal statistics from FDA FAERS data
  ☆50Updated last year
• ninglab / CTKG
  The Clinical Trials Knowledge Graph
  ☆59Updated 2 years ago
• ctti-clinicaltrials / aact
  Improving Public Access to Aggregate Content of ClinicalTrials.gov
  ☆155Updated 2 weeks ago
• kgayvert / PrOCTOR
  A Data-Driven Approach to Predicting Successes and Failures of Clinical Trials
  ☆18Updated 5 years ago
• ddomingof / PubMed2PDF
  A Python package to download full article PDFs from OA publications
  ☆47Updated 7 months ago
• MadhumitaSushil / OncLLMExtraction
  Expert-Curated Oncology Reports to Advance Language Model Inference
  ☆29Updated last year