A repo for implementation of Graph features autoencoder for expression values prediction and imputation
☆18May 11, 2021Updated 5 years ago
Alternatives and similar repositories for GraphFeatureAutoencoder
Users that are interested in GraphFeatureAutoencoder are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆13Apr 16, 2026Updated last month
- surrogate quantitative interpretability for deepnets☆24Aug 11, 2025Updated 9 months ago
- Massively-Parallel Natural Extension of Reference Frame☆34Jan 18, 2023Updated 3 years ago
- Tool for reliability assessment of omics peprocessing☆11Jan 13, 2026Updated 4 months ago
- R package with netDx software and data for examples☆13Feb 22, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Compute the neighborhood consolidation matrix and identify SHRs☆14Jun 12, 2025Updated 11 months ago
- Explaining the Markdown syntax for inquiring minds.☆11May 11, 2017Updated 9 years ago
- Causal inference, differential expression, and co-expression for scRNA-seq☆21Dec 19, 2025Updated 5 months ago
- PaiNN in jax☆11Jan 14, 2025Updated last year
- ☆14Feb 27, 2026Updated 2 months ago
- Analysis of Single Cell Expression data in Julia☆26Updated this week
- deepSimDEF offers single- and multi-channel deep learning models for functional analysis of genes using Gene Ontology annotations of gene…☆13May 13, 2022Updated 4 years ago
- ☆13Jul 30, 2018Updated 7 years ago
- ☆12Feb 10, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Captain Mifune: A graphical data-domain modeling and a bulk data importer tool for Neo4j☆13Oct 24, 2023Updated 2 years ago
- Improving Inductive Link Prediction Using Hyper-Relational Facts☆16May 25, 2022Updated 3 years ago
- ☆14Apr 8, 2022Updated 4 years ago
- Graph in Graph Neural Network (https://arxiv.org/abs/2407.00696)☆15Sep 12, 2024Updated last year
- Structural space exploration of AlphaFold DB☆12Oct 8, 2021Updated 4 years ago
- alphafold FAPE loss☆10Sep 28, 2021Updated 4 years ago
- This repository is for the paper "A generative nonparametric Bayesian model for whole genomes"☆15Jun 7, 2023Updated 2 years ago
- Sequence-based prediction of peptide-TCR interactions using paired chain data☆13Feb 2, 2026Updated 3 months ago
- A user-friendly library that brings familiar DataFrame-style operations to AnnData objects with a simple and expressive API.☆17Updated this week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Genomic sequence preprocessing toolkit☆14May 16, 2026Updated last week
- MaxEnt code for fitting simulation outcomes/statistical models to observations☆16Jun 28, 2022Updated 3 years ago
- ☆25Jun 27, 2024Updated last year
- https://www.biorxiv.org/content/10.1101/2023.07.03.547592v2☆32Jan 22, 2025Updated last year
- Pipeline for generating reference and perturbed sequences for input into predictive models.☆11Nov 15, 2024Updated last year
- The ProteoWizard Library and Tools are a set of modular and extensible open-source, cross-platform tools and software libraries that faci…☆22Aug 25, 2023Updated 2 years ago
- ☆14Dec 8, 2022Updated 3 years ago
- A simple Python package for creating radar charts.☆12Jul 9, 2021Updated 4 years ago
- Pathway-based sparse deep neural network☆19Nov 9, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A curated list of bioinformatics bench-marking papers and resources.☆15Nov 27, 2019Updated 6 years ago
- A Generalizable Model for 3D Chromosome Reconstruction Using Graph Convolutional Neural Networks☆18Sep 9, 2021Updated 4 years ago
- Analysis workflow for investigating the structural context of PTMs☆11Jan 8, 2024Updated 2 years ago
- This repository consists of scripts and workflows used for generating results, figures, and tables published in the article: Can Liu, And…☆15Feb 17, 2021Updated 5 years ago
- Supporting material for "Processing and visualization of metabolomics data using R"☆20Jan 3, 2017Updated 9 years ago
- [ACM TOMM'2025] "MMHCL: Multi-Modal Hypergraph Contrastive Learning for Recommendation"☆31Aug 13, 2025Updated 9 months ago
- MEME motif-based sequence analysis tools (http://meme-suite.org), with FreeBSD tweaks☆16Jul 26, 2017Updated 8 years ago