Alternatives and similar repositories for scGAE

Users that are interested in scGAE are comparing it to the libraries listed below

• Joye9285 / scGAC
  single-cell graph attentional clustering
  ☆12Updated 3 years ago
• davidbuterez / CellVGAE
  An unsupervised scRNA-seq analysis workflow with graph attention networks
  ☆23Updated 2 years ago
• DHUDBlab / scDSC
  ☆21Updated 3 years ago
• ttgump / scDCC
  scDCC: Single Cell Deep Constrained Clustering
  ☆40Updated 10 months ago
• xuebaliang / scziDesk
  Deep soft K-means clustering with self-training for single cell RNA sequence data
  ☆25Updated 4 years ago
• xiaoyeye / GCNG
  using graph convolutional neural network and spaital transcriptomics data to infer cell-cell interactions
  ☆56Updated 3 years ago
• QUST-AIBBDRC / scGMAI
  scGMAI: a Gaussian mixture model for clustering single-cell RNA-seq data based on deep autoencoder
  ☆16Updated 3 years ago
• biomed-AI / GraphSCI
  Imputing Single-cell RNA-seq data by combining Graph Convolution and Autoencoder Neural Networks
  ☆19Updated 11 months ago
• zpliulab / GENELink
  ☆31Updated 2 years ago
• ciortanmadalina / contrastive-sc
  ☆14Updated 3 years ago
• cmzuo11 / scMVAE
  Deep joint-leaning single-cell multi-omics model
  ☆16Updated 2 years ago
• rvinas / HYFA
  Hypergraph Factorisation
  ☆23Updated 6 months ago
• ciortanmadalina / graph-sc
  ☆18Updated 3 years ago
• kodaim1115 / scMM
  ☆17Updated 3 years ago
• hui2000ji / scETM
  A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.
  ☆50Updated 3 years ago
• kimmo1019 / JAE
  Single cell joint embedding and modality prediction with autoencoder
  ☆9Updated 2 years ago
• Philyzh8 / scTAG
  "ZINB-based Graph Embedding Autoencoder for Single-cell RNA-seq Interpretations" in AAAI 2022
  ☆22Updated 2 years ago
• RaminHasibi / GraphFeatureAutoencoder
  A repo for implementation of Graph features autoencoder for expression values prediction and imputation
  ☆18Updated 4 years ago
• ttgump / scDeepCluster
  scDeepCluster for Single Cell RNA-seq data
  ☆100Updated 10 months ago
• ioanabica / DiffVAE
  Code for Nature Scientific Reports 2020 paper: "Unsupervised generative and graph neural methods for modelling cell differentiation" by I…
  ☆18Updated 4 years ago
• xiaoyeye / CCST
  Cell clustering for spatial transcriptomics data with graph neural network
  ☆62Updated 2 years ago
• vandijklab / scGAT
  Code to reproduce results in Ravindra NG* & Sehanobish A* et al. 2020, "Disease State Prediction From Single-Cell Data Using Graph Attent…
  ☆16Updated 5 years ago
• eugenelin1 / DRA
  ☆16Updated 4 years ago
• melobio / Concerto-reproducibility
  ☆38Updated 2 years ago
• AltschulerWu-Lab / scScope
  ☆49Updated 5 years ago
• ttgump / scDeepCluster_pytorch
  Pytorch implementation of scDeepCluster for Single Cell RNA-seq data
  ☆32Updated 10 months ago
• sldyns / scAce
  scAce: an adaptive embedding and clustering method for scRNA-seq data
  ☆11Updated last year
• ChengF-Lab / autoCell
  ☆16Updated 2 years ago
• OSU-BMBL / deepmaps
  Single-cell biological network inference using a heterogeneous graph transformer
  ☆73Updated 3 months ago
• zhanglab-wbgcas / STGRNS
  ☆29Updated 2 years ago