Goosang-Yu / genetLinks
Python library for genome editing, CRISPR gRNA design and prediction
☆21Updated 2 months ago
Alternatives and similar repositories for genet
Users that are interested in genet are comparing it to the libraries listed below
Sorting:
- Source codes and examples for DeepPrime☆13Updated last year
- Multiple sequence aligner for protein and DNA/RNA.☆22Updated 8 years ago
- A collection of Web Service Clients to consume EBI's Job Dispatcher tools via REST APIs☆55Updated last year
- uorf4u is a bioinformatics tool for conserved upstream ORF annotation.☆13Updated 4 months ago
- A PCR primer tool for DNA assembly flows☆33Updated last year
- sangerseq_viewer is a python package to automatically visualize Sanger sequencing results and the corresponding annotated sequence map.☆40Updated last year
- Graphical user interface for de novo sequencing of tandem mass spectra☆15Updated last year
- Codon optimizer for tissue-specific expression☆17Updated last year
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆38Updated 8 months ago
- Fast, sensitive and accurate protein remote homology search on GPUs☆16Updated last year
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆30Updated last year
- The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.☆20Updated last year
- ORFFinder in Python☆15Updated last year
- Protein structure alignment and search algorithm☆79Updated 3 weeks ago
- Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments.☆37Updated last month
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆35Updated 2 years ago
- Attentive deep learning model for antimicrobial peptide prediction☆55Updated 10 months ago
- Detecting Sequence Signals in Targeting Peptides Using Deep Learning☆14Updated 6 years ago
- Modeling whole bacterial genome as a sequence of proteins.☆86Updated 3 weeks ago
- Confidence Estimation for Mass Spectrometry Proteomics☆13Updated 8 months ago
- ☆18Updated 8 months ago
- ☆32Updated last year
- Tool package to perform in-silico CRISPR analysis and assessment☆34Updated 2 months ago
- An atlas of CRISPR-Cas systems from systematic genome mining☆25Updated 6 months ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆35Updated last year
- ☆13Updated last month
- Python Implementation of Codon Adaption Index☆37Updated 3 years ago
- ☆74Updated last year
- Antimicrobial Peptide Structural Evolution Miner (AMP-SEMiner), an integrated AI framework designed for the simultaneous identification o…☆13Updated 9 months ago
- Sequence-based prediction of peptide-TCR interactions using paired chain data☆13Updated last week