Python library for genome editing, CRISPR gRNA design and prediction
☆21Dec 2, 2025Updated 5 months ago
Alternatives and similar repositories for genet
Users that are interested in genet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Source codes and examples for DeepPrime☆14Dec 17, 2024Updated last year
- Text Generation WebUI via Vicuna or Alpaca in google colaboratory☆18May 3, 2023Updated 3 years ago
- Modelling insertion efficiency for Prime Insertion Experiments☆13Apr 1, 2024Updated 2 years ago
- Python based Graphical User Interface for generating input files for and running molecular dynamic simulation.☆10Aug 27, 2024Updated last year
- Tool package to perform in-silico CRISPR analysis and assessment☆37Nov 17, 2025Updated 6 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- CRISPR/Cas-directed HDR genome editing suite: finds+scores gRNA targets, generates donor DNAs, & produces optimal cPCR primer designs.☆13Oct 18, 2021Updated 4 years ago
- Importing and manipulating Hi-C data in R☆13Apr 29, 2026Updated 3 weeks ago
- Manipulate genomic features and validate the syntax and reference sequence of your GFF3 files☆10Dec 26, 2022Updated 3 years ago
- Phased structural variant discovery in pangenomes☆42Apr 20, 2026Updated last month
- An atlas of CRISPR-Cas systems from systematic genome mining☆25Aug 5, 2025Updated 9 months ago
- A snakemake workflow for metagenomic projects☆15Feb 16, 2023Updated 3 years ago
- ☆13Jan 20, 2026Updated 4 months ago
- Convert sequence IDs between ucsc/refseq/genbank☆17Aug 28, 2018Updated 7 years ago
- A pretrained single cell gene expression language model☆12Jun 6, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs☆27Apr 2, 2026Updated last month
- Fast python code to merge paired-end reads☆13Oct 29, 2021Updated 4 years ago
- Scalable Deep Learning for RNA Secondary Structure Prediction☆42Sep 23, 2025Updated 8 months ago
- Codes and sample data supporting the Dutch Microbiome Project. The preprint is currently available at https://www.biorxiv.org/content/10.…☆37Jun 24, 2021Updated 4 years ago
- Multiple sequence aligner for protein and DNA/RNA.☆26Jan 3, 2018Updated 8 years ago
- ☆10Mar 6, 2025Updated last year
- Modify existing reference fasta and gff3/gtf files to include a new sequence☆33Feb 27, 2026Updated 2 months ago
- Comprehensive design of CRISPR gRNAs for nucleases and base editors☆29Mar 6, 2026Updated 2 months ago
- [Cell Patterns] Codes for paper: scELMo: Embeddings from Language Models are Good Learners for Single-cell Data Analysis☆24Jan 31, 2026Updated 3 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Package to Score Sequences using Rule Set 3☆16Nov 10, 2025Updated 6 months ago
- Lapse (9.00-12.02) + Poops (9.00-12.52) exploit☆43Feb 25, 2026Updated 3 months ago
- StaG Metagenomic Workflow Collaboration☆28Aug 20, 2024Updated last year
- PS4 southbridge/torus firmware collection☆27Feb 8, 2026Updated 3 months ago
- A step-by-step tutorial to run Molecular Dynamics Simulations with enhanced sampling of a pepitide using PLUMED implemented in GROMACS to…☆16Mar 4, 2024Updated 2 years ago
- provides common tools and lookup tables used primarily by the hgvs and uta packages☆25Jan 12, 2026Updated 4 months ago
- molecular plots in Jupyter, powererd by Blender Geometry Nodes☆59Mar 27, 2024Updated 2 years ago
- PanEffect is a JavaScript framework to explore variant effects across a pangenome. The tool has two views that allows a user to (1) expl…☆13Jan 30, 2024Updated 2 years ago
- Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments☆337May 14, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Meme dumper☆18May 10, 2026Updated 2 weeks ago
- ☆125Updated this week
- Code for deep learning guided design of dynamic proteins☆33Jul 16, 2024Updated last year
- MYB transcription factors are one of the largest gene family in plants and control many processes. This repository provides additional ba…☆12Feb 26, 2026Updated 3 months ago
- ☆11Feb 2, 2026Updated 3 months ago
- Some papers and exploit writeups about WebKit.☆21Feb 18, 2024Updated 2 years ago
- DataViz protocols book for wet lab scientists☆17Dec 10, 2025Updated 5 months ago