mattaq31 / GelGenieLinks
Open-Source package for segmentation and analysis of gel electrophoresis images using machine learning. Both a python framework for training/running models and a QuPath GUI extension are available.
☆81Updated 5 months ago
Alternatives and similar repositories for GelGenie
Users that are interested in GelGenie are comparing it to the libraries listed below
Sorting:
- ☆97Updated 6 months ago
- De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experiments☆109Updated 3 weeks ago
- File format for 96-well plate layouts.☆24Updated 2 years ago
- Vector graphics cartoons from protein structure☆56Updated 3 years ago
- Python Package for the downstream analysis of mass-spectrometry-based proteomics data☆79Updated last month
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆74Updated 2 years ago
- Shiny app to easily create publishable plots for scientific papers☆38Updated 5 months ago
- Comprehensive Python client for the Uniprot REST API☆54Updated 3 months ago
- Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/☆290Updated 6 months ago
- A list of tools on proteomics using deep learning☆106Updated last year
- Deep learning framework for proteomics☆141Updated 3 weeks ago
- FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks☆42Updated 6 months ago
- Install alphafold on the local machine, get out of docker.☆103Updated 4 years ago
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆39Updated last year
- ProCyon: A multimodal foundation model for protein phenotypes☆54Updated last month
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆44Updated last year
- iLearnPlus is the first machine-learning platform with both graphical- and web-based user interface that enables the construction of auto…☆121Updated last year
- modular & open DIA search☆96Updated this week
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆77Updated last month
- A collection of available Python tools for Proteomics analysis☆66Updated 6 years ago
- Code for 5UTR project☆26Updated 2 years ago
- Python library for calculting synergy of drug combinations using several drug synergy frameworks☆36Updated last year
- ☆44Updated 2 months ago
- A visible neural network model for drug response prediction☆150Updated 2 years ago
- ☆39Updated 4 years ago
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆91Updated last month
- Community-curated tutorials and datasets for ML in proteomics☆55Updated 2 months ago
- BRAID is a department within Genentech dedicated to advancing biological and clinical sciences through artificial intelligence.☆217Updated 4 months ago
- Infrastructure of AlphaX ecosystem☆52Updated this week
- python tools for TCR:peptide-MHC modeling and analysis☆86Updated last year