CeSpGRN: Inferring cell specific GRN using single-cell gene expression data
☆21Mar 23, 2026Updated 3 weeks ago
Alternatives and similar repositories for CeSpGRN
Users that are interested in CeSpGRN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆90Jun 24, 2023Updated 2 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆21Mar 25, 2024Updated 2 years ago
- Implementation of CellNEST method☆63Updated this week
- ☆24Aug 20, 2024Updated last year
- Variant impact phenotyping using Perturb-seq☆10Apr 22, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- scID☆14Oct 21, 2021Updated 4 years ago
- Tools for accessing open data sets published by the Allen Institute for Brain Sciences☆15Jun 29, 2021Updated 4 years ago
- a unified single-cell data integration framework by optimal transport☆37Oct 1, 2024Updated last year
- Auto-annotations from Mouse brain development☆12Jul 11, 2020Updated 5 years ago
- Spatial direct messaging detected by bivariate Moran☆31Jul 16, 2025Updated 8 months ago
- ☆19Dec 1, 2021Updated 4 years ago
- Ressources for Boinformatics Trainings☆13Nov 20, 2023Updated 2 years ago
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Jan 5, 2024Updated 2 years ago
- ☆13Jul 1, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆19May 5, 2021Updated 4 years ago
- A method for calculating single cell entropy and reconstructing cell differentiation lineage using single-cell RNA-seq data☆10May 26, 2023Updated 2 years ago
- Parse PubMed XML into a data frame in R☆16May 2, 2021Updated 4 years ago
- ☆11Aug 8, 2025Updated 8 months ago
- ☆15Aug 5, 2022Updated 3 years ago
- Querying cellular states and programs by learning representations of gene sets☆16Nov 2, 2025Updated 5 months ago
- ☆13Feb 24, 2026Updated last month
- scAce: an adaptive embedding and clustering method for scRNA-seq data☆12Sep 8, 2023Updated 2 years ago
- Motif-Informed Network Inference of cell type-specific gene regulatory networks in plants☆23Mar 16, 2026Updated 3 weeks ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Nature Computational Science: Predicting drug responses of unseen cell types through transfer learning with foundation models☆35Feb 2, 2026Updated 2 months ago
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆12May 31, 2024Updated last year
- ☆13Jan 23, 2025Updated last year
- CRAN Task View: Reproducible Research☆19Mar 9, 2026Updated last month
- Evaluation framework for computationally inferred gene networks from single-cell data.☆18Oct 23, 2025Updated 5 months ago
- An R package for performing cell typing in SMI and other single cell data☆49May 19, 2025Updated 10 months ago
- Graph-based Decoding for In Situ Sequencing☆10Jul 2, 2020Updated 5 years ago
- An r interface to perform ROMA☆10Aug 24, 2018Updated 7 years ago
- Plotting pytorch tensors made easy!☆15Jan 28, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆18Sep 13, 2022Updated 3 years ago
- A library for the deconvolution of bulk cell samples using single-cell RNA expression data.☆23Nov 3, 2021Updated 4 years ago
- A Spatial Transcriptomics Geospatial Profile Recovery System Tool through Anchors☆19Jul 24, 2025Updated 8 months ago
- Automated marker-based annotation of cell types☆14Aug 8, 2022Updated 3 years ago
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆102Mar 28, 2024Updated 2 years ago
- Statistical Analysis of Docking Results and Scoring functions☆21Feb 22, 2026Updated last month
- Tool to parse fasterq/fastq dump outputs for SRA scRNAseq data☆18Mar 7, 2024Updated 2 years ago