PennLINC / CuBIDSLinks
Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.
☆28Updated 2 weeks ago
Alternatives and similar repositories for CuBIDS
Users that are interested in CuBIDS are comparing it to the libraries listed below
Sorting:
- A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners☆49Updated 7 months ago
- JuBrain Anatomy Toolbox☆22Updated 6 years ago
- PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface☆17Updated last year
- Nipype implementation of BetaSeries Correlations (Beta)☆35Updated 2 years ago
- Rough draft of a guide for reviewing fmriprep's QA outputs☆34Updated 3 years ago
- A package for publication-ready brain surface figures☆68Updated last month
- Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.☆48Updated 2 years ago
- A pythonic 3D viewer to visualize and plot brains and neuroimaging data☆36Updated last year
- Fragments FreeSurfer parcellation annotation in N-equal sized parcels☆29Updated 5 years ago
- Tools for mesh surface-based operations☆38Updated 9 months ago
- Generate and run SLURM jobs on HPCs☆12Updated 4 months ago
- A BIDS App for minimal preprocessing using the HCP Pipelines☆37Updated 2 weeks ago
- Run ICA-AROMA on fMRIPrep derivatives☆22Updated last month
- Bootstrapped Analysis of Stable Clusters- A semi-automated fMRI individual and group level functional parcellation technique☆26Updated 6 years ago
- MOVED TO https://github.com/nipreps/dmriprep☆17Updated 3 years ago
- A repo for tools to aggregate public MRIQC data (Neurohackademy 2019)☆26Updated 5 years ago
- Toolbox for structural and functional brain connectivity reconstruction.☆18Updated last year
- An exemplary task analysis workflow to run on OpenNeuro's ds000003 data, after preprocessing with fMRIPrep☆32Updated 4 years ago
- Diffuse Cluster Estimation and Regression. A de-noising tool.☆19Updated 3 years ago
- Scripts for comparing different fmriprep denoising approaches on quality control functional connectivity (QC-FC) motion, QC-FC distance-d…☆15Updated 4 years ago
- This repository contains all code for the BLMM toolbox.☆20Updated last year
- MATLAB code for reading and writing CIFTI connectivity files☆67Updated last year
- ☆21Updated last week
- Nuisance removal tool for fMRI data☆57Updated last year
- MATLAB toolbox for visualizing brain data on surfaces.☆36Updated last year
- Public repository of cmig_tools including FEMA☆24Updated last year
- We created a model to remove physiological noise in fast fMRI without external reference signals.☆12Updated 6 years ago
- Tool to convert raw MRI datasets to BIDS-compatible datasets☆35Updated 3 years ago
- Official public repository for the XCP Engine. This tool is deprecated in favor of XCP-D and ASLPrep.☆65Updated 2 years ago
- bids application for processing functional MRI data, robust to scanner, acquisition and age variability.☆57Updated 3 months ago