Processing pipelines for the HCP
☆648May 23, 2026Updated this week
Alternatives and similar repositories for HCPpipelines
Users that are interested in HCPpipelines are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆742Mar 25, 2026Updated 2 months ago
- Connectome Workbench☆222May 14, 2026Updated last week
- The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets☆132Nov 8, 2022Updated 3 years ago
- MATLAB code for reading and writing CIFTI connectivity files☆70Feb 25, 2026Updated 3 months ago
- fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…☆733May 14, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆148Jul 5, 2025Updated 10 months ago
- A BIDS App for minimal preprocessing using the HCP Pipelines☆37Mar 16, 2026Updated 2 months ago
- Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries☆43Jul 21, 2022Updated 3 years ago
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆249May 5, 2026Updated 2 weeks ago
- Flexible DICOM conversion into structured directory layouts☆279Apr 28, 2026Updated 3 weeks ago
- MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …☆350Updated this week
- Workflows and interfaces for neuroimaging packages☆825Updated this week
- Utilities to use HCP and HCP-like data with nilearn and other Python tools☆52Apr 29, 2023Updated 3 years ago
- The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface …☆179Jan 15, 2026Updated 4 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆218Jun 23, 2023Updated 2 years ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆164Updated this week
- Public release of The Cole-Anticevic Brain-wide Network Partition (CAB-NP)☆87Feb 8, 2021Updated 5 years ago
- Configurable Pipeline for the Analysis of Connectomes☆80Oct 31, 2025Updated 6 months ago
- micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read…☆120May 6, 2026Updated 2 weeks ago
- Automated Fiber Quantification☆77Mar 6, 2024Updated 2 years ago
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆360Jan 28, 2026Updated 3 months ago
- MATLAB/Octave GIfTI Library☆28Mar 10, 2025Updated last year
- ☆108Jul 23, 2017Updated 8 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆198Updated this week
- The Midnight Scanning Club Codebase☆41Jun 26, 2019Updated 6 years ago
- Neuroimaging analysis and visualization suite☆834Updated this week
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆88Jul 31, 2025Updated 9 months ago
- Preprocessing of diffusion MRI☆181May 6, 2026Updated 2 weeks ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆74Feb 14, 2026Updated 3 months ago
- Pycortex is a python-based toolkit for surface visualization of fMRI data☆658May 12, 2026Updated 2 weeks ago
- A neuroscience library for Python, intended to complement the existing nibabel library.☆131Oct 14, 2025Updated 7 months ago
- Cortical neuroimaging visualization in Python☆253Dec 15, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute☆84May 9, 2025Updated last year
- Automatic White Matter Bundle Segmentation☆262Feb 23, 2026Updated 3 months ago
- PALM: Permutation Analysis of Linear Models☆82Mar 15, 2026Updated 2 months ago
- ☆54Oct 26, 2025Updated 6 months ago
- GLSL surface rendering source code. Compiled versions available from NITRC. Loads 3DS, CTM, DXF, FreeSurfer, GII (GIfTI), GTS, LWO2, MS3D…☆135Apr 27, 2026Updated 3 weeks ago
- Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data☆128Dec 19, 2025Updated 5 months ago
- Script-framework using FSL, Freesurfer and AFNI functionality for automatization and high-throughput processing of MRI data in clustered …☆38Mar 12, 2017Updated 9 years ago