Washington-University / HCPpipelinesLinks
Processing pipelines for the HCP
☆586Updated last week
Alternatives and similar repositories for HCPpipelines
Users that are interested in HCPpipelines are comparing it to the libraries listed below
Sorting:
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆331Updated last month
- fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…☆683Updated 2 weeks ago
- ☆652Updated 2 weeks ago
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆181Updated 3 weeks ago
- Flexible DICOM conversion into structured directory layouts☆261Updated last week
- This repository contains the files that generate Andy's Brain Book on ReadTheDocs.☆195Updated 3 weeks ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆143Updated last month
- Harmonization of multi-site imaging data with ComBat☆295Updated 2 years ago
- Brain Imaging Data Structure (BIDS) Specification☆315Updated this week
- BIDScoin converts your source-level neuroimaging data to BIDS☆144Updated this week
- Preprocessing of diffusion MRI☆158Updated 2 months ago
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆227Updated 5 months ago
- Official AFNI source and documentation☆175Updated last week
- Neuroimaging analysis and visualization suite☆697Updated this week
- MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …☆318Updated this week
- A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.☆195Updated 2 weeks ago
- Automatic White Matter Bundle Segmentation☆243Updated last year
- The Starter-kit has moved to the new BIDS website.☆267Updated 4 months ago
- ☆190Updated 2 years ago
- The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets☆123Updated 2 years ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆99Updated last week
- A toolbox for comparing brain maps☆291Updated 2 months ago
- Automated Fiber Quantification☆77Updated last year
- The SHiVAi pipeline for preprocessing, AI-based segmentation, and reporting of cCVSD biomarkers from brain MRI images☆16Updated last month
- Connectome Workbench☆204Updated last week
- Learn Nipype with these tutorial notebooks - go here to see them online -->☆123Updated last year
- Generate custom Docker and Singularity images, and minimize existing containers☆348Updated this week
- Gradient Unwarping in Python☆37Updated 6 months ago
- Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data☆109Updated 5 months ago
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆73Updated 11 months ago