Processing pipelines for the HCP
☆636Feb 27, 2026Updated last week
Alternatives and similar repositories for HCPpipelines
Users that are interested in HCPpipelines are comparing it to the libraries listed below
Sorting:
- The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets☆130Nov 8, 2022Updated 3 years ago
- ☆714Sep 19, 2025Updated 5 months ago
- Connectome Workbench☆216Updated this week
- MATLAB code for reading and writing CIFTI connectivity files☆69Feb 25, 2026Updated last week
- fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…☆720Updated this week
- ☆144Jul 5, 2025Updated 8 months ago
- Flexible DICOM conversion into structured directory layouts☆275Jan 22, 2026Updated last month
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆243Feb 9, 2026Updated 3 weeks ago
- A BIDS App for minimal preprocessing using the HCP Pipelines☆37Dec 15, 2025Updated 2 months ago
- Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries☆42Jul 21, 2022Updated 3 years ago
- MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …☆340Feb 27, 2026Updated last week
- The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface …☆174Jan 15, 2026Updated last month
- ☆213Jun 23, 2023Updated 2 years ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆162Feb 23, 2026Updated last week
- Utilities to use HCP and HCP-like data with nilearn and other Python tools☆51Apr 29, 2023Updated 2 years ago
- Workflows and interfaces for neuroimaging packages☆813Oct 27, 2025Updated 4 months ago
- Configurable Pipeline for the Analysis of Connectomes☆79Oct 31, 2025Updated 4 months ago
- Public release of The Cole-Anticevic Brain-wide Network Partition (CAB-NP)☆83Feb 8, 2021Updated 5 years ago
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆191Jan 8, 2026Updated last month
- micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read…☆116Feb 20, 2026Updated 2 weeks ago
- ☆107Jul 23, 2017Updated 8 years ago
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆350Jan 28, 2026Updated last month
- Neuroimaging analysis and visualization suite☆802Updated this week
- Automated Fiber Quantification☆77Mar 6, 2024Updated 2 years ago
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆85Jul 31, 2025Updated 7 months ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆73Feb 14, 2026Updated 2 weeks ago
- Cortical neuroimaging visualization in Python☆252Dec 15, 2023Updated 2 years ago
- Preprocessing of diffusion MRI☆178Feb 19, 2026Updated 2 weeks ago
- MATLAB/Octave GIfTI Library☆27Mar 10, 2025Updated 11 months ago
- ☆47Oct 26, 2025Updated 4 months ago
- PALM: Permutation Analysis of Linear Models☆81Dec 20, 2025Updated 2 months ago
- Pycortex is a python-based toolkit for surface visualization of fMRI data☆650Updated this week
- A neuroscience library for Python, intended to complement the existing nibabel library.☆130Oct 14, 2025Updated 4 months ago
- Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute☆84May 9, 2025Updated 9 months ago
- Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software pac…☆54Updated this week
- A toolbox for comparing brain maps☆319Apr 23, 2025Updated 10 months ago
- Automatic White Matter Bundle Segmentation☆254Feb 23, 2026Updated last week
- A toolbox for working with Allen Human Brain Atlas microarray expression data☆112Sep 3, 2024Updated last year
- The Midnight Scanning Club Codebase☆40Jun 26, 2019Updated 6 years ago