Alternatives and similar repositories for dipy

Users that are interested in dipy are comparing it to the libraries listed below

• nipy / nibabel
  Python package to access a cacophony of neuro-imaging file formats
  ☆757Updated 3 weeks ago
• nipy / nipype
  Workflows and interfaces for neuroimaging packages
  ☆800Updated last month
• spinalcordtoolbox / spinalcordtoolbox
  Comprehensive and open-source library of analysis tools for MRI of the spinal cord.
  ☆247Updated last week
• nipy / nipy
  Neuroimaging in Python FMRI analysis package
  ☆406Updated last year
• MRtrix3 / mrtrix3
  MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …
  ☆332Updated last week
• ANTsX / ANTsPy
  A fast medical imaging analysis library in Python with algorithms for registration, segmentation, and more.
  ☆813Updated this week
• freesurfer / freesurfer
  Neuroimaging analysis and visualization suite
  ☆768Updated this week
• nipreps / mriqc
  Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
  ☆342Updated last month
• Deep-MI / FastSurfer
  PyTorch implementation of FastSurferCNN
  ☆566Updated this week
• ANTsX / ANTs
  Advanced Normalization Tools (ANTs)
  ☆1,402Updated last week
• neuronets / nobrainer
  A framework for developing neural network models for 3D image processing.
  ☆167Updated 2 weeks ago
• aramis-lab / clinica
  Software platform for clinical neuroimaging studies
  ☆264Updated last week
• Washington-University / HCPpipelines
  Processing pipelines for the HCP
  ☆620Updated this week
• MIC-DKFZ / TractSeg
  Automatic White Matter Bundle Segmentation
  ☆249Updated 2 years ago
• ANTsX / ANTsPyNet
  Pre-trained models and utilities for deep learning on medical images in Python (Keras/TensorFlow)
  ☆240Updated 2 weeks ago
• nipreps / smriprep
  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
  ☆159Updated this week
• nipreps / fmriprep
  fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…
  ☆707Updated last week
• ReproNim / neurodocker
  Generate custom Docker and Singularity images, and minimize existing containers
  ☆353Updated this week
• mhe / pynrrd
  Simple pure-python module for reading and writing nrrd files.
  ☆124Updated 11 months ago
• poldracklab / pydeface
  defacing utility for MRI images
  ☆131Updated last year
• icometrix / dicom2nifti
  ☆386Updated 6 months ago
• nipy / heudiconv
  Flexible DICOM conversion into structured directory layouts
  ☆272Updated last month
• nipy / PySurfer
  Cortical neuroimaging visualization in Python
  ☆249Updated 2 years ago
• SuperElastix / SimpleElastix
  Multi-lingual medical image registration library
  ☆534Updated 2 years ago
• moloney / dcmstack
  DICOM to Nifti conversion with meta data preservation
  ☆77Updated last year
• cMadan / openMorph
  Curated list of open-access databases with human structural MRI data
  ☆129Updated 6 years ago
• nipy / mindboggle
  Automated anatomical brain label/shape analysis software (+ website)
  ☆154Updated 4 years ago
• rordenlab / dcm2niix
  dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC
  ☆1,079Updated last month
• loli / medpy
  Medical image processing in Python
  ☆613Updated last year
• BBillot / SynthSeg
  Contrast-agnostic segmentation of MRI scans
  ☆520Updated last year