DIPY is the paragon 3D/4D+ medical imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.
☆837Sep 1, 2026Updated this week
Alternatives and similar repositories for dipy
Users that are interested in dipy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Preprocessing of diffusion MRI☆187Updated this week
- MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …☆353Aug 25, 2026Updated last week
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆97Jul 20, 2026Updated last month
- Python package to access a cacophony of neuro-imaging file formats☆790Updated this week
- Workflows and interfaces for neuroimaging packages☆834Aug 25, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Neuroimaging in Python FMRI analysis package☆414Dec 24, 2024Updated last year
- Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data☆130Dec 19, 2025Updated 8 months ago
- A fast medical imaging analysis library in Python with algorithms for registration, segmentation, and more.☆881Aug 19, 2026Updated 2 weeks ago
- FURY - Free Unified Rendering in pYthon.☆298Updated this week
- Advanced Normalization Tools (ANTs)☆1,497Updated this week
- Automatic White Matter Bundle Segmentation☆265Feb 23, 2026Updated 6 months ago
- Massively parallel Monte Carlo diffusion MR simulator written in Python.☆30Nov 2, 2024Updated last year
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆77Feb 14, 2026Updated 6 months ago
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆121Jul 15, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- MOVED TO https://github.com/nipreps/dmriprep☆17Dec 26, 2022Updated 3 years ago
- Implementation of the White Matter Query Language and associated tools for dMRI white matter tract extraction and analysis☆32Jul 24, 2025Updated last year
- Machine learning for NeuroImaging in Python☆1,427Updated this week
- Please visit our new location: https://github.com/tractometry/pyAFQ☆60Oct 10, 2024Updated last year
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline☆51Mar 5, 2024Updated 2 years ago
- cupy-accelerated DIPY☆12Mar 16, 2021Updated 5 years ago
- Create realistic digital phantoms in diffusion MRI.☆40Jul 4, 2023Updated 3 years ago
- Flexible DICOM conversion into structured directory layouts☆283Updated this week
- Generate custom Docker and Singularity images, and minimize existing containers☆361Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC☆1,184Aug 25, 2026Updated last week
- Toolbox for parameter estimation of the Standard Model of diffusion in white matter☆30Apr 6, 2026Updated 4 months ago
- Neuroimaging analysis and visualization suite☆868Updated this week
- Processing pipelines for the HCP☆651Updated this week
- ☆15Jan 26, 2022Updated 4 years ago
- fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…☆747Updated this week
- Contrast-agnostic segmentation of MRI scans☆572Jul 17, 2024Updated 2 years ago
- White matter tractography clustering and more...☆82Jun 13, 2025Updated last year
- Automated Fiber Quantification☆78Mar 6, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆93Jul 31, 2025Updated last year
- Automated anatomical brain label/shape analysis software (+ website)☆155Aug 24, 2026Updated last week
- Pre-trained models and utilities for deep learning on medical images in Python (Keras/TensorFlow)☆261Aug 23, 2026Updated last week
- TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity☆63Sep 23, 2024Updated last year
- Microstructure Diffusion Toolbox☆60Mar 4, 2024Updated 2 years ago
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆371Jul 20, 2026Updated last month
- A toolbox for comparing brain maps☆341Jun 13, 2026Updated 2 months ago