Alternatives and similar repositories for dipy

Users that are interested in dipy are comparing it to the libraries listed below

• nipy / nibabel
  Python package to access a cacophony of neuro-imaging file formats
  ☆749Updated last week
• nipy / nipype
  Workflows and interfaces for neuroimaging packages
  ☆795Updated 2 weeks ago
• MRtrix3 / mrtrix3
  MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …
  ☆328Updated this week
• ANTsX / ANTsPy
  A fast medical imaging analysis library in Python with algorithms for registration, segmentation, and more.
  ☆794Updated this week
• freesurfer / freesurfer
  Neuroimaging analysis and visualization suite
  ☆742Updated this week
• spinalcordtoolbox / spinalcordtoolbox
  Comprehensive and open-source library of analysis tools for MRI of the spinal cord.
  ☆246Updated this week
• nipy / nipy
  Neuroimaging in Python FMRI analysis package
  ☆404Updated 10 months ago
• Deep-MI / FastSurfer
  PyTorch implementation of FastSurferCNN
  ☆554Updated last week
• ANTsX / ANTsPyNet
  Pre-trained models and utilities for deep learning on medical images in Python (Keras/TensorFlow)
  ☆237Updated 2 weeks ago
• SuperElastix / SimpleElastix
  Multi-lingual medical image registration library
  ☆531Updated 2 years ago
• rordenlab / dcm2niix
  dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC
  ☆1,059Updated last week
• nipreps / mriqc
  Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
  ☆342Updated 2 months ago
• aramis-lab / clinica
  Software platform for clinical neuroimaging studies
  ☆262Updated last month
• neuronets / nobrainer
  A framework for developing neural network models for 3D image processing.
  ☆167Updated this week
• SuperElastix / elastix
  Official elastix repository
  ☆541Updated this week
• BBillot / SynthSeg
  Contrast-agnostic segmentation of MRI scans
  ☆505Updated last year
• SimpleITK / SimpleITK
  SimpleITK: a layer built on top of the Insight Toolkit (ITK), intended to simplify and facilitate ITK's use in rapid prototyping, educati…
  ☆1,017Updated last week
• ANTsX / ANTs
  Advanced Normalization Tools (ANTs)
  ☆1,385Updated this week
• icometrix / dicom2nifti
  ☆383Updated 4 months ago
• ReproNim / neurodocker
  Generate custom Docker and Singularity images, and minimize existing containers
  ☆351Updated 2 weeks ago
• SlicerDMRI / SlicerDMRI
  Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.
  ☆84Updated 8 months ago
• Washington-University / HCPpipelines
  Processing pipelines for the HCP
  ☆615Updated this week
• qMRLab / qMRLab
  Quantitative MRI Made Easy with qMRLab: MRI software for data Simulation, analysis and visualization
  ☆173Updated 4 months ago
• cMadan / openMorph
  Curated list of open-access databases with human structural MRI data
  ☆129Updated 6 years ago
• BRAINSia / BRAINSTools
  A suite of tools for medical image processing focused on brain analysis
  ☆124Updated this week
• nipy / mindboggle
  Automated anatomical brain label/shape analysis software (+ website)
  ☆153Updated 4 years ago
• loli / medpy
  Medical image processing in Python
  ☆611Updated last year
• nipy / heudiconv
  Flexible DICOM conversion into structured directory layouts
  ☆270Updated 3 weeks ago
• poldracklab / pydeface
  defacing utility for MRI images
  ☆128Updated last year
• moloney / dcmstack
  DICOM to Nifti conversion with meta data preservation
  ☆77Updated 11 months ago