MIC-DKFZ / TractSegLinks
Automatic White Matter Bundle Segmentation
☆244Updated last year
Alternatives and similar repositories for TractSeg
Users that are interested in TractSeg are comparing it to the libraries listed below
Sorting:
- White matter tractography clustering and more...☆77Updated last month
- Pre-trained models and utilities for deep learning on medical images in Python☆229Updated 2 weeks ago
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆107Updated 8 months ago
- Harmonization of multi-site imaging data with ComBat☆299Updated 2 years ago
- A framework for joint super-resolution and image synthesis, without requiring real training data☆172Updated last year
- Multi-site dMRI harmonization☆48Updated 2 months ago
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆73Updated this week
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆37Updated 4 years ago
- Deep Whole Brain Segmentation Using SLANT Method☆123Updated last year
- Example download scripts for the OASIS3 project☆153Updated 6 months ago
- A space to log issues, updates, and software related to the ATLAS (Anatomical Tracings of Lesions After Stroke) database.☆83Updated 2 years ago
- Pretrained neural networks for UK Biobank brain MRI images. SFCN, 3D-ResNet etc.☆154Updated 10 months ago
- Multi Atlas Segmentation and Morphometric analysis toolkit (MASMAT) for mouse brain MRI☆38Updated 10 months ago
- Automated Fiber Quantification☆77Updated last year
- Multi-task U-Net for the simultaneous segmentation and skull-stripping of mouse brain MRI☆22Updated 3 years ago
- A project to provide custom sorting and renaming of dicom files☆78Updated 2 months ago
- RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.☆11Updated 3 weeks ago
- LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation☆36Updated 4 months ago
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆39Updated 5 months ago
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆103Updated 2 months ago
- ☆29Updated last year
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆144Updated this week
- Preprocessing of diffusion MRI☆158Updated last week
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆52Updated last year
- MRI brain extraction tool☆345Updated 7 months ago
- ☆369Updated last month
- Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)☆46Updated 4 years ago
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆76Updated last year
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆332Updated 2 months ago
- DICOM to NIfTI conversion, NIfTI tools☆99Updated 11 months ago