Generate custom Docker and Singularity images, and minimize existing containers
☆361Sep 7, 2026Updated last week
Alternatives and similar repositories for neurodocker
Users that are interested in neurodocker are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Flexible DICOM conversion into structured directory layouts☆284Updated this week
- Python tools for querying and manipulating BIDS datasets.☆268Updated this week
- Workflows and interfaces for neuroimaging packages☆835Updated this week
- A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners☆56May 12, 2025Updated last year
- Learn Nipype with these tutorial notebooks - go here to see them online -->☆132Mar 21, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…☆755Updated this week
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆379Updated this week
- Preprocessing of diffusion MRI☆190Updated this week
- A toolbox for comparing brain maps☆347Jun 13, 2026Updated 3 months ago
- BIDScoin converts your source-level neuroimaging data to BIDS☆159Jul 2, 2026Updated 2 months ago
- Official public repository for the XCP Engine. This tool is deprecated in favor of XCP-D and ASLPrep.☆65Apr 19, 2023Updated 3 years ago
- Pydra Dataflow Engine☆144Updated this week
- a BIDS app for pseudo-anonymization of neuroimaging data☆56Oct 24, 2025Updated 10 months ago
- Fit Linear Models to BIDS Datasets☆82Aug 17, 2026Updated last month
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- The Starter-kit has moved to the new BIDS website.☆277Aug 20, 2026Updated 3 weeks ago
- Processing tools for high-resolution neuroimaging☆73Dec 18, 2025Updated 9 months ago
- Brain Imaging Analysis Kit☆372Updated this week
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆168Sep 9, 2026Updated last week
- Processing pipelines for the HCP☆654Sep 9, 2026Updated last week
- Modeling and statistical inference on fMRI data in Python☆99Apr 2, 2020Updated 6 years ago
- TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity☆63Sep 23, 2024Updated last year
- ☆224Jun 23, 2023Updated 3 years ago
- A Reproducible Workflow for Structural and Functional Connectome Ensemble Learning☆124Feb 1, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!☆107Mar 12, 2025Updated last year
- A framework for developing neural network models for 3D image processing.☆167Apr 14, 2026Updated 5 months ago
- Neuroimaging analysis and visualization suite☆871Updated this week
- dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC☆1,191Updated this week
- Machine learning for NeuroImaging in Python☆1,433Updated this week
- Fast regression and mediation analysis of vertex or voxel MRI data with TFCE☆31May 21, 2023Updated 3 years ago
- Public release of The Cole-Anticevic Brain-wide Network Partition (CAB-NP)☆90Jun 24, 2026Updated 2 months ago
- Validator for the Brain Imaging Data Structure☆186Dec 11, 2025Updated 9 months ago
- Convert T score brain statistical map to Z score map☆19Jan 25, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- MOVED TO https://github.com/nipreps/dmriprep☆17Dec 26, 2022Updated 3 years ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆77Feb 14, 2026Updated 7 months ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆118Sep 8, 2026Updated last week
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆252Jun 9, 2026Updated 3 months ago
- Neuroimaging Data Model (NIDM): describing neuroimaging data and provenance☆33Mar 22, 2023Updated 3 years ago
- defacing utility for MRI images☆141Updated this week
- Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.☆50Apr 17, 2023Updated 3 years ago