Alternatives and similar repositories for MRtrix3Tissue

Users that are interested in MRtrix3Tissue are comparing it to the libraries listed below

• ecr05 / MSM_HOCR
  Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
  ☆41Updated 2 years ago
• HumanBrainED / NHP-BrainExtraction
  ☆39Updated 3 years ago
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆53Updated last week
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 8 months ago
• sameerd / DiffusionTensorImaging
  Single Shell Free Water Elimination Model for Diffusion Tensor Imaging
  ☆25Updated last year
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆63Updated last week
• gbarisano / alps
  Bash script to compute DTI-ALPS
  ☆58Updated last week
• daducci / COMMIT
  Linear framework to combine tractography and tissue micro-structure estimation with diffusion MRI
  ☆46Updated last month
• isebenius / MIND
  This repository contains a Python implementation of Morphometric INverse Divergence (MIND) calculation for the estimation of structural s…
  ☆37Updated last year
• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆73Updated 11 months ago
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆70Updated this week
• pGarciaS / PREEMACS
  PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface
  ☆17Updated last year
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆50Updated 2 weeks ago
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆71Updated 7 months ago
• ChristianGaser / cat12
  Computational Anatomy Toolbox for SPM12 or SPM25
  ☆36Updated this week
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆78Updated 4 years ago
• Washington-University / cifti-matlab
  MATLAB code for reading and writing CIFTI connectivity files
  ☆66Updated 8 months ago
• kwagstyl / surface_tools
  Tools for mesh surface-based operations
  ☆36Updated 4 months ago
• NotaCS / Functionnectome
  Project your functional brain signal onto the white matter, and explore the pathways supporting brain functions.
  ☆30Updated last year
• MICA-MNI / BrainStat
  A statistics and context decoding toolbox for neuroimaging.
  ☆105Updated 9 months ago
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆67Updated last year
• PennLINC / xcp_d
  Post-processing of fMRIPrep, NiBabies, and HCP outputs
  ☆98Updated 2 weeks ago
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆158Updated 2 months ago
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆66Updated last week
• miac-research / psmd
  Peak width of Skeletonized Mean Diffusivity (PSMD)
  ☆12Updated 3 weeks ago
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆64Updated 7 months ago
• pboutinaud / SHiVAi
  The SHiVAi pipeline for preprocessing, AI-based segmentation, and reporting of cCVSD biomarkers from brain MRI images
  ☆16Updated last month
• sina-mansour / UKB-connectomics
  This repository will host scripts used to map structural and functional brain connectivity matrices for the UK biobank dataset.
  ☆65Updated last year
• DiedrichsenLab / cerebellar_atlases
  ☆36Updated last month
• MASILab / SynBOLD-DisCo
  Synthetic BOLD images for distortion correction of fMRI without additional calibration scans
  ☆26Updated last year