Alternatives and similar repositories for scilpy

Users that are interested in scilpy are comparing it to the libraries listed below

• AthenaEPI / dmipy
  The open source toolbox for reproducible diffusion MRI-based microstructure estimation
  ☆108Updated 10 months ago
• MASILab / PreQual
  An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
  ☆52Updated last year
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆165Updated 2 months ago
• SlicerDMRI / whitematteranalysis
  White matter tractography clustering and more...
  ☆80Updated 4 months ago
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆54Updated this week
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆73Updated last week
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆71Updated last week
• yeatmanlab / AFQ
  Automated Fiber Quantification
  ☆77Updated last year
• yeatmanlab / pyAFQ
  Please visit our new location: https://github.com/tractometry/pyAFQ
  ☆59Updated last year
• nipreps / smriprep
  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
  ☆153Updated last week
• daducci / AMICO
  Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data
  ☆116Updated last month
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆105Updated this week
• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆79Updated 2 months ago
• pnlbwh / dMRIharmonization
  Multi-site dMRI harmonization
  ☆49Updated 5 months ago
• NYU-DiffusionMRI / DESIGNER-v1
  Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline
  ☆52Updated last year
• xiangruili / dicm2nii
  DICOM to NIfTI conversion, NIfTI tools
  ☆102Updated 2 months ago
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆70Updated 2 weeks ago
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆65Updated last month
• CoBrALab / RABIES
  fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/
  ☆46Updated this week
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆51Updated last week
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆71Updated 11 months ago
• dmritrekker / trekker
  dMRI based fiber tracking using parallel transport tractography
  ☆27Updated 3 months ago
• mathieuboudreau / qsm-tools
  List of open-source quantitative susceptibility mapping (QSM) MRI software packages and data
  ☆69Updated 2 years ago
• BioMedIA / dhcp-structural-pipeline
  structural analysis of neonatal brain MRI scans
  ☆57Updated 4 years ago
• QMICodeBase / TORTOISEV4
  Official TORTOISE Diffusion MRI Processing Pipeline V4 Source Code and Documentation
  ☆31Updated last month
• Diffusion-MRI / awesome-preclinical-diffusion-mri
  ☆18Updated last year
• sameerd / DiffusionTensorImaging
  Single Shell Free Water Elimination Model for Diffusion Tensor Imaging
  ☆30Updated last year
• CoBrALab / optimized_antsMultivariateTemplateConstruction
  A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support
  ☆32Updated last week
• Conxz / multiBrain
  A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!
  ☆99Updated 7 months ago
• freesurfer / surfa
  Python utilities for medical image and surface-based analysis
  ☆36Updated last week