scilus / scilpyLinks
The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
☆73Updated last week
Alternatives and similar repositories for scilpy
Users that are interested in scilpy are comparing it to the libraries listed below
Sorting:
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆107Updated 8 months ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆52Updated last year
- Preprocessing of diffusion MRI☆160Updated this week
- White matter tractography clustering and more...☆77Updated last month
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆70Updated last week
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆73Updated this week
- DICOM to NIfTI conversion, NIfTI tools☆100Updated 11 months ago
- Please visit our new location: https://github.com/tractometry/pyAFQ☆60Updated 9 months ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆69Updated last year
- Multi-site dMRI harmonization☆48Updated 2 months ago
- Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data☆112Updated 6 months ago
- niimath - a clone of fslmaths. Try the live demo:☆66Updated this week
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline☆53Updated last year
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆28Updated 3 weeks ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆99Updated this week
- Processing tools for high-resolution neuroimaging☆71Updated 8 months ago
- Automated Fiber Quantification☆77Updated last year
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆53Updated 3 weeks ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆144Updated this week
- List of open-source quantitative susceptibility mapping (QSM) MRI software packages and data☆68Updated 2 years ago
- ☆29Updated last year
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆63Updated this week
- ☆17Updated last year
- structural analysis of neonatal brain MRI scans☆55Updated 4 years ago
- Open-source eddy-current and head-motion correction for dMRI.☆18Updated 6 months ago
- Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain☆30Updated this week
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆44Updated last week
- MP2RAGE Scripts - T1 map correction & Background noise removal☆61Updated 2 years ago
- dMRI based fiber tracking using parallel transport tractography☆26Updated last month
- fMRIPrep Lifespan - A robust, transparent workflow tailored for neonate and infant MRI☆33Updated last month