scilus / scilpy
The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
☆66Updated this week
Alternatives and similar repositories for scilpy:
Users that are interested in scilpy are comparing it to the libraries listed below
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆105Updated 4 months ago
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆53Updated last week
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆50Updated 8 months ago
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline☆51Updated last year
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆67Updated this week
- niimath - a clone of fslmaths. Try the live demo:☆60Updated 3 months ago
- Multi-site dMRI harmonization☆47Updated this week
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆69Updated 8 months ago
- White matter tractography clustering and more...☆73Updated 2 weeks ago
- dMRI based fiber tracking using parallel transport tractography☆26Updated last month
- List of open-source quantitative susceptibility mapping (QSM) MRI software packages and data☆64Updated last year
- CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI☆12Updated 3 weeks ago
- Preprocessing of diffusion MRI☆153Updated last week
- ☆27Updated 11 months ago
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆25Updated last month
- Preprocessing of arterial spin labeling (ASL) data☆48Updated last week
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆63Updated 5 months ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆67Updated last year
- DICOM to NIfTI conversion, NIfTI tools☆95Updated 7 months ago
- RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.☆11Updated 9 months ago
- LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation☆32Updated 3 weeks ago
- Processing tools for high-resolution neuroimaging☆72Updated 4 months ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆95Updated 3 weeks ago
- Automated Fiber Quantification☆77Updated last year
- ☆22Updated 2 months ago
- A workflow to allow Freesurfer recon-all to run on brain image with gliomas☆29Updated 10 months ago
- ☆17Updated last year
- Segmentation of Choroid Plexus using Gaussian Mixture Model☆14Updated last week
- ☆35Updated 3 years ago
- Weakly supervised perivascular spaces segmentation with salient guidance of Frangi filter☆13Updated last year