The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
☆95Mar 26, 2026Updated 2 weeks ago
Alternatives and similar repositories for scilpy
Users that are interested in scilpy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity☆63Sep 23, 2024Updated last year
- Public release of Track-to-Learn: A general framework for tractography with deep reinforcement learning☆26Feb 4, 2026Updated 2 months ago
- Scripts used to recreate the results of the ISMRM 2015 Tractography Challenge☆18Dec 9, 2022Updated 3 years ago
- Automatic White Matter Bundle Segmentation☆257Feb 23, 2026Updated last month
- Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical context☆21Aug 6, 2025Updated 8 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Create realistic digital phantoms in diffusion MRI.☆40Jul 4, 2023Updated 2 years ago
- Preprocessing of diffusion MRI☆178Mar 17, 2026Updated 3 weeks ago
- Purifibre removes spurious streamlines from tractograms☆10Apr 14, 2022Updated 3 years ago
- MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …☆345Updated this week
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline☆51Mar 5, 2024Updated 2 years ago
- WM tract atlases for the human (HCP and UK Biobank) and Macaque brain and connectivity blueprint atlases for the human (HCP) and macaque …☆18Dec 23, 2021Updated 4 years ago
- Research work about learning to do tracking.☆13Jun 28, 2019Updated 6 years ago
- Reconstruction of preprocessed q-space images (dMRI)☆21Mar 17, 2026Updated 3 weeks ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆73Feb 14, 2026Updated last month
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A real-time diffusion MRI viewer for Linux and Windows using OpenGL 4.6.☆10Apr 23, 2025Updated 11 months ago
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆118Updated this week
- [MedIA 2023] "Superficial White Matter Analysis: An Efficient Point-cloud-based Deep Learning Framework with Supervised Contrastive Learn…☆24Jul 21, 2023Updated 2 years ago
- DIPY is the paragon 3D/4D+ medical imaging library in Python. Contains generic methods for spatial normalization, signal processing, mach…☆816Updated this week
- Multi-site dMRI harmonization☆50May 14, 2025Updated 10 months ago
- MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit☆102Feb 24, 2026Updated last month
- Linear framework to combine tractography and tissue microstructure estimation with diffusion MRI☆50Mar 9, 2026Updated last month
- FOD-Net: A Deep Learning Method for Fiber Orientation Distribution Angular Super Resolution☆27Apr 26, 2022Updated 3 years ago
- ORG Fiber Clustering White Matter Atlas☆31Oct 18, 2025Updated 5 months ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- DMRITool is an open souce toolbox for reconstruction, processing and visualization of diffusion MRI data (DWI, tensor, ODF,EAP, fibers et…☆26May 11, 2019Updated 6 years ago
- MRtrix3Tissue adds capabilities for 3-Tissue CSD modelling and analysis to a complete version of MRtrix3.☆18Apr 5, 2024Updated 2 years ago
- White matter tractography clustering and more...☆80Jun 13, 2025Updated 9 months ago
- ☆18Feb 6, 2026Updated 2 months ago
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆194Mar 6, 2026Updated last month
- The QDECR package for vertex-wise analyses in R☆12May 26, 2023Updated 2 years ago
- Flexible DICOM conversion into structured directory layouts☆276Mar 30, 2026Updated last week
- ☆19Jul 8, 2024Updated last year
- Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data☆128Dec 19, 2025Updated 3 months ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Implementation of the White Matter Query Language and associated tools for dMRI white matter tract extraction and analysis☆31Jul 24, 2025Updated 8 months ago
- Official TORTOISE Diffusion MRI Processing Pipeline V4 Source Code and Documentation☆34Dec 19, 2025Updated 3 months ago
- Automated Fiber Quantification☆77Mar 6, 2024Updated 2 years ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆109Updated this week
- KUL/UZ NeuroImaging Suite. A set of tools for brain and spine MRI analysis.☆21Jan 12, 2026Updated 2 months ago
- BrainPainter - Brain Visualisation Software☆72Feb 28, 2023Updated 3 years ago
- ISBI 2023 - A Registration- and Uncertainty-based Framework for White Matter Tract Segmentation with Only One Annotated Subject☆10Sep 10, 2023Updated 2 years ago