Vaa3D / Vaa3D_Wiki
www.vaa3d.org
☆78Updated 7 years ago
Alternatives and similar repositories for Vaa3D_Wiki:
Users that are interested in Vaa3D_Wiki are comparing it to the libraries listed below
- Binary releases of Vaa3D and related software components☆44Updated last year
- www.vaa3d.org☆108Updated 11 months ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 4 years ago
- www.vaa3d.org : download the latest Binary version here https://github.com/Vaa3D/release/releases/tag/v3.200☆42Updated last month
- ClearMap 2 with WobblyStitcher, TubeMap and CellMap☆120Updated this week
- Create 3D/4D animations using a natural language-based syntax☆59Updated 2 years ago
- Tools for distributed alignment of massive images☆81Updated last week
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆41Updated 9 months ago
- Automated 3D brain registration with support for multiple species and atlases.☆133Updated 2 weeks ago
- Deprecated, instead check out: https://github.com/preibischLab/multiview-reconstruction & https://github.com/PreibischLab/BigStitcher☆23Updated 7 months ago
- Software package for neuron reconstruction and visualization☆38Updated last year
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆60Updated 5 years ago
- Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Inst…☆67Updated 2 years ago
- Intensify3D is an image normalization tool for large scale fluorescent imaging. It corrects heterogeneities in the signal (defined by the…☆18Updated 4 years ago
- A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images☆84Updated last year
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆47Updated 3 weeks ago
- TREES toolbox☆28Updated 6 months ago
- FluoRender is an interactive tool for confocal microscopy data analysis.☆43Updated this week
- A napari plugin for itk-elastix☆38Updated 10 months ago
- ImgLib2/BDV implementation of Stitching for large datasets☆73Updated 2 weeks ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆37Updated last year
- ☆13Updated 5 years ago
- Matlab function to import ROIs from ImageJ☆27Updated 5 years ago
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆54Updated 3 weeks ago
- The ImageJ framework for quantification of neuronal anatomy☆48Updated this week
- Software for the paper "Fast and robust active neuron segmentation in two-photon calcium imaging using spatio-temporal deep learning," Pr…☆65Updated 5 years ago
- Deep Learning for EM Connectomics☆14Updated 2 years ago
- Fast, Simple Calcium Imaging Segmentation with Fully Convolutional Networks (https://arxiv.org/abs/1707.06314)☆28Updated 2 years ago
- AICS Segmentation (One-Way) Mirror☆45Updated 4 years ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago