ntustison / ANTsXMouseBrainMappingLinks
The ANTsX Ecosystem for Mapping the Mouse Brain
☆17Updated last month
Alternatives and similar repositories for ANTsXMouseBrainMapping
Users that are interested in ANTsXMouseBrainMapping are comparing it to the libraries listed below
Sorting:
- Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain☆34Updated this week
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆35Updated 2 months ago
- Modern Neuroimaging Made Simple☆26Updated this week
- A modular toolkit for Bruker MRI raw-data handling.☆50Updated last week
- precon_all surface pipline☆29Updated last month
- Non-linear warps between common rhesus macaque brain templates☆28Updated last month
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆36Updated 2 years ago
- This is a mirror. Feel free to use the issue tracker. PRs welcome.☆28Updated 3 weeks ago
- Automated 3D brain registration with support for multiple species and atlases.☆143Updated last week
- U-Net based automatic Rat brain-mask Segmentation tool, developed by Hsu☆18Updated 4 years ago
- Medical image format converter: from raw Bruker ParaVision to nifti.☆31Updated 2 years ago
- Open resource exchange platform for non-human primate neuroimaging☆22Updated last month
- A Rat fMRI multi-center study☆33Updated 3 years ago
- The plug-and-play, browser-accessible, containerised data analysis environment.☆57Updated this week
- a standalone fork of nipy/nibabel#656☆35Updated 2 weeks ago
- Brain flatmaps generation☆11Updated 3 years ago
- Space for discussion of a standardized structure (directory layout + metadata) for experimental data in systems neuroscience, similar to …☆23Updated 2 years ago
- Tools for MRI mouse brain morphometry☆31Updated 9 years ago
- Bruker ParaVision to NIfTI conversion☆14Updated 5 years ago
- Small Animal Magnetic Resonance Imaging via Python.☆43Updated last year
- Multi-modal Image Registration And Connectivity anaLysis☆47Updated last week
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Updated last year
- Generate a package-manager-friendly mouse brain atlases collection.☆22Updated 2 years ago
- ☆10Updated 4 years ago
- Segmentation of anatomical structures in a common coordinate space☆35Updated 2 weeks ago
- CloudReg☆11Updated last year
- ClearMap 2 with WobblyStitcher, TubeMap and CellMap☆135Updated 2 weeks ago
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆48Updated this week
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆77Updated last week
- fMRIPrep Lifespan - A robust, transparent workflow tailored for neonate and infant MRI☆37Updated this week