ntustison / ANTsXMouseBrainMappingLinks
The ANTsX Ecosystem for Mapping the Mouse Brain
☆14Updated 2 weeks ago
Alternatives and similar repositories for ANTsXMouseBrainMapping
Users that are interested in ANTsXMouseBrainMapping are comparing it to the libraries listed below
Sorting:
- Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain☆31Updated this week
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆31Updated last week
- BrkRaw: A comprehensive tool to access raw Bruker Biospin MRI data☆47Updated 2 weeks ago
- Modern Neuroimaging Made Simple☆20Updated last week
- Medical image format converter: from raw Bruker ParaVision to nifti.☆31Updated last year
- a standalone fork of nipy/nibabel#656☆33Updated 2 weeks ago
- U-Net based automatic Rat brain-mask Segmentation tool, developed by Hsu☆16Updated 3 years ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆36Updated last year
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆45Updated 3 weeks ago
- This is a mirror. Feel free to use the issue tracker. PRs welcome.☆27Updated last week
- Non-linear warps between common rhesus macaque brain templates☆26Updated 3 months ago
- precon_all surface pipline☆29Updated 3 months ago
- A Rat fMRI multi-center study☆33Updated 3 years ago
- Bruker ParaVision to NIfTI conversion☆13Updated 5 years ago
- Open resource exchange platform for non-human primate neuroimaging☆22Updated 5 months ago
- Small Animal Magnetic Resonance Imaging via Python.☆43Updated last year
- niimath - a clone of fslmaths. Try the live demo:☆68Updated last month
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆71Updated 3 weeks ago
- QSMxT is an end-to-end software toolbox for Quantitative Susceptibility Mapping.☆51Updated 2 weeks ago
- Brain flatmaps generation☆11Updated 2 years ago
- MP2RAGE Scripts - T1 map correction & Background noise removal☆65Updated 2 years ago
- TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity☆61Updated 11 months ago
- Automated 3D brain registration with support for multiple species and atlases.☆136Updated 2 weeks ago
- GPU-based 3D non-rigid volumetric registration☆41Updated 3 weeks ago
- The plug-and-play, browser-accessible, containerised data analysis environment.☆52Updated this week
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆75Updated last week
- Processing tools for high-resolution neuroimaging☆71Updated 9 months ago