ntustison / ANTsXMouseBrainMappingLinks
The ANTsX Ecosystem for Mapping the Mouse Brain
☆16Updated last week
Alternatives and similar repositories for ANTsXMouseBrainMapping
Users that are interested in ANTsXMouseBrainMapping are comparing it to the libraries listed below
Sorting:
- Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain☆32Updated this week
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆35Updated last month
- Modern Neuroimaging Made Simple☆22Updated last week
- BrkRaw: A comprehensive tool to access raw Bruker Biospin MRI data☆47Updated last week
- Medical image format converter: from raw Bruker ParaVision to nifti.☆31Updated last year
- U-Net based automatic Rat brain-mask Segmentation tool, developed by Hsu☆18Updated 4 years ago
- Non-linear warps between common rhesus macaque brain templates☆28Updated this week
- Brain flatmaps generation☆11Updated 3 years ago
- precon_all surface pipline☆29Updated 6 months ago
- This is a mirror. Feel free to use the issue tracker. PRs welcome.☆27Updated 2 weeks ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆36Updated 2 years ago
- a standalone fork of nipy/nibabel#656☆35Updated last week
- ClearMap 2 with WobblyStitcher, TubeMap and CellMap☆130Updated 2 weeks ago
- ☆13Updated last year
- The plug-and-play, browser-accessible, containerised data analysis environment.☆54Updated last week
- A Rat fMRI multi-center study☆33Updated 3 years ago
- Automated 3D brain registration with support for multiple species and atlases.☆140Updated last week
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆78Updated last week
- Multi-modal Image Registration And Connectivity anaLysis☆46Updated this week
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆75Updated 2 weeks ago
- Open resource exchange platform for non-human primate neuroimaging☆22Updated last week
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆47Updated this week
- Bruker ParaVision to NIfTI conversion☆14Updated 5 years ago
- niimath - a clone of fslmaths. Try the live demo:☆71Updated last month
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆106Updated this week
- GPU-based 3D non-rigid volumetric registration☆41Updated 3 months ago
- Code and model of article "End-to-end learning of brain tissue segmentation from imperfect labeling" https://arxiv.org/abs/1612.00940☆16Updated 7 years ago
- fMRIPrep Lifespan - A robust, transparent workflow tailored for neonate and infant MRI☆36Updated last month
- Tools for MRI mouse brain morphometry☆31Updated 8 years ago
- Small Animal Magnetic Resonance Imaging via Python.☆43Updated last year