Medical image format converter: from raw Bruker ParaVision to nifti.
☆31Dec 31, 2023Updated 2 years ago
Alternatives and similar repositories for bruker2nifti
Users that are interested in bruker2nifti are comparing it to the libraries listed below
Sorting:
- Bruker ParaVision to NIfTI conversion☆14May 11, 2020Updated 5 years ago
- Small Animal Magnetic Resonance Imaging via Python.☆43Mar 4, 2024Updated 2 years ago
- A Python package providing I/O interface for Bruker data sets☆29Feb 26, 2026Updated last week
- Tools to automate simple manipulations and measurements of medical images and segmentations in nifti format.☆23May 19, 2025Updated 9 months ago
- atlasBREX: Automated averaged template-derived brain extraction in animal MRI☆17Jan 15, 2024Updated 2 years ago
- small mammals brain MRI☆15Oct 13, 2023Updated 2 years ago
- Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain☆36Feb 20, 2026Updated 2 weeks ago
- A General Rodent MRI Skull-Stripping Tool Based on Multi-Center Data☆10Dec 7, 2024Updated last year
- Code and performance tests to demonstrate the COUNTLESS algorithm. https://medium.com/@willsilversmith/countless-high-performance-2x-down…☆10Oct 23, 2019Updated 6 years ago
- Convert Pulseq files to Bruker sequences☆10Dec 12, 2018Updated 7 years ago
- A generally applicable whole-brain preprocessing toolbox for mice and rats☆12Jul 11, 2024Updated last year
- ☆13Jul 2, 2024Updated last year
- Matlab toolbox to reconstruct and process MRI data☆14Jan 30, 2023Updated 3 years ago
- Multi-Template Mouse Brain MRI Atlas (MBMA): both in-vivo and ex-vivo☆27Jan 20, 2024Updated 2 years ago
- Tools for MRI mouse brain morphometry☆32Jan 16, 2017Updated 9 years ago
- Discussions and suggestions of backwards incompatible changes to BIDS☆12Apr 27, 2024Updated last year
- GE HealthCare MRI research☆18Jun 30, 2025Updated 8 months ago
- a WebGL2 based NIFTI volume viewer.☆14May 26, 2021Updated 4 years ago
- Tools for accessing open data sets published by the Allen Institute for Brain Sciences☆15Jun 29, 2021Updated 4 years ago
- The ANTsX Ecosystem for Mapping the Mouse Brain☆18Dec 2, 2025Updated 3 months ago
- A medical image converter☆32Jul 20, 2025Updated 7 months ago
- Computational Anatomy Toolbox for SPM12 or SPM25☆48Updated this week
- Procedure to create monkey brain surfaces and project results to it☆16Feb 14, 2025Updated last year
- Reconstruction of preprocessed q-space images (dMRI)☆20Feb 19, 2026Updated 2 weeks ago
- colour map for brain imaging☆20Feb 12, 2026Updated 3 weeks ago
- Tools for spatial and temporal autocorrelation☆27Apr 24, 2023Updated 2 years ago
- Generate a package-manager-friendly mouse brain atlases collection.☆22Aug 4, 2023Updated 2 years ago
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆51Updated this week
- Python module to handle Bruker Paravision MRI files (parameter files, raw data, processed data).☆21Feb 3, 2026Updated last month
- U-Net based automatic Rat brain-mask Segmentation tool, developed by Hsu☆18Nov 15, 2021Updated 4 years ago
- An ansible playbook to deploy a complete standalone neuroimaging workstation☆26Oct 27, 2025Updated 4 months ago
- Multi-task U-Net for the simultaneous segmentation and skull-stripping of mouse brain MRI☆23Aug 20, 2021Updated 4 years ago
- This does everything that I need. Layering, smoothing-within layers, layer-connectivity, RF-coil,combination, 2D-dridding of layers and c…☆23Jan 16, 2026Updated last month
- ☆28Feb 3, 2026Updated last month
- Improvements of the ZapLine function to remove line noise from EEG/MEG data. Adds automatic detection of the number of components to remo…☆33Apr 14, 2023Updated 2 years ago
- A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners☆53May 12, 2025Updated 9 months ago
- MarsBaR region of interest toolbox for SPM☆26Jan 23, 2025Updated last year
- MP2RAGE Scripts - T1 map correction & Background noise removal☆72Feb 13, 2026Updated 3 weeks ago
- A high content analysis method to study skeletal muscle☆12Apr 26, 2024Updated last year