dtward / image_lddmm_tensorflow
Image mapping using the LDDMM algorithm, implemented in tensorflow
☆16Updated 3 years ago
Alternatives and similar repositories for image_lddmm_tensorflow:
Users that are interested in image_lddmm_tensorflow are comparing it to the libraries listed below
- Python notebooks and data for learning about image registration. Hosted at a summer school☆9Updated 6 years ago
- Very fast greedy diffeomorphic registration code☆71Updated this week
- 2D image registration in python, using napari.☆16Updated 3 years ago
- Perform image registration of 2D and 3D volumes using state-of-the-art deformable registration.☆23Updated 5 years ago
- Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Inst…☆67Updated 2 years ago
- Open library for LDDMM and Metamorphosis in PyTorch☆23Updated this week
- Application for analysis and modelling of volumetric medical imaging data☆27Updated 11 months ago
- Neuroimaging in PyTorch☆91Updated this week
- PCA Model for Brain Extraction☆17Updated 6 years ago
- 🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes☆47Updated 11 months ago
- ☆29Updated last year
- Script that registers Histology slices to volumetric image data☆11Updated last year
- Python Implementation of the LDDMM algorithm☆52Updated 4 years ago
- Python scripts to read and write the CREMI hdf5 file format.☆38Updated 2 years ago
- Adaptive Riemannian Optimization for Multi-Scale Diffeomorphic Registration☆42Updated last week
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆70Updated 3 years ago
- ☆28Updated 3 years ago
- This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.☆53Updated 3 months ago
- Cython based wrapper for IRTK☆10Updated 9 years ago
- An abundance of augmentation layers☆15Updated 3 weeks ago
- This is a tool to quickly preview nifti images on the terminal☆60Updated 3 months ago
- Image Registration and Computational Anatomy in PyTorch☆21Updated 3 years ago
- Intensity normalization of multi-channel MRI images using the method proposed by Nyul et al. 2000☆59Updated 3 years ago
- ☆19Updated 2 years ago
- The ANTsX Ecosystem for Mapping the Mouse Brain☆11Updated last month
- ☆13Updated last month
- This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utili…☆154Updated 2 months ago
- Multi-modal Image Registration And Connectivity anaLysis☆43Updated 2 weeks ago
- An open-source application for the analysis and visualization of segmented vasculature datasets☆111Updated 11 months ago
- Python implementation of 2d and 3d image registration☆33Updated 3 years ago