NCBI-Hackathons / Machine_Learning_Immunogenicity
This is a repo for the Machine Learning Immunogenicity Team in the August 2016 NCBI Hackathon
☆23Updated 8 years ago
Alternatives and similar repositories for Machine_Learning_Immunogenicity
Users that are interested in Machine_Learning_Immunogenicity are comparing it to the libraries listed below
Sorting:
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- Predict mutated T-cell epitopes from sequencing data☆30Updated 2 months ago
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆50Updated 5 years ago
- ☆25Updated 4 years ago
- Deep proteome inference from peptide profiles☆13Updated 4 years ago
- ☆28Updated 6 years ago
- Detects hotspot regions for somatic mutations in 3D protein structures☆2Updated last year
- 🏺 Exploring novel tumor epitope identification☆34Updated 4 years ago
- The manuscript repository for the Open Pediatric Brain Tumor Atlas Project☆13Updated last year
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- a metabologenomic pipeline integrating metabolomic and genomic data to identify novel RiPPs and their BGCs☆12Updated 3 years ago
- Python module for the easy handling and analysis of DNase-seq data☆37Updated 5 years ago
- Code to run OncoSig Analyses☆18Updated 4 years ago
- All the fun and adventure of MHC naming, now in Python☆10Updated 2 years ago
- Python library and scripts for retrieval and storage of genomics data in HDF5 format☆26Updated 6 years ago
- Python interface to amino acid properties and IEDB☆56Updated 7 months ago
- Concise: Keras extension for regulatory genomics☆35Updated 2 years ago
- 3D hotspot mutation proximity analysis tool☆47Updated 2 years ago
- Software for Ontogenic aNalysis of Antibody Repertoires☆18Updated 3 months ago
- Predicting the impact of mutations on kinase–substrate phosphorylation☆10Updated 2 years ago
- Practical Introduction to Bioinformatics and Systems Biology with R (mainly)☆19Updated 15 years ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Updated last year
- ☆17Updated 7 years ago
- Alignment and antibody assembly pipelines for Croote et al. (Science, 2018)☆10Updated 3 years ago
- Multi-omics disease sub-type specific drug repositioning aided with expression signatures from ConnectivityMap☆16Updated 5 years ago
- Bioinformatics for Benched Biologists☆22Updated 5 years ago
- ☆47Updated 2 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- CWL implementation of CloudNeo: A cloud pipeline for identifying patient-specific tumor neoantigens☆19Updated 6 years ago
- ☆35Updated 6 years ago