Meyer-DH / AgingClock
☆18Updated 2 weeks ago
Alternatives and similar repositories for AgingClock:
Users that are interested in AgingClock are comparing it to the libraries listed below
- Tutorial for using the perturbseq library to load and manipulate experiments☆18Updated 5 years ago
- This is the official repository for the Human Cell Atlas Heart project.☆29Updated 4 years ago
- R implementation of GeneTrajectory☆52Updated 10 months ago
- Cellular dynamics across aged human brains uncover a multicellular cascade leading to Alzheimer’s disease☆48Updated 2 months ago
- Identifying tumor cells at the single-cell level using machine learning☆48Updated 3 months ago
- ☆57Updated 7 months ago
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆55Updated last year
- MAGIC - imputation and de-noising single-cell RNA seq data sets☆26Updated 5 years ago
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆60Updated 9 months ago
- Code related to the Celligner manuscript☆45Updated 4 years ago
- ☆64Updated last year
- Single cell omics biology annotations☆49Updated 3 weeks ago
- Code repository for single cell RNA-seq☆34Updated 4 years ago
- User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins☆59Updated 8 months ago
- Tools for sgRNA calling in direct capture Perturb-seq data☆32Updated last year
- ☆57Updated 4 years ago
- ☆77Updated last year
- ☆41Updated last year
- ☆69Updated last week
- Coarse-graining of large single-cell RNA-seq data into metacells☆72Updated 5 months ago
- SciLifeLab SIB Summer School for Advanced topics in Single Cell Omics. Site: https://nbisweden.github.io/single-cell_sib_scilifelab_2021/☆23Updated 3 years ago
- R package for Pathway RespOnsive GENe activity inference☆99Updated 2 years ago
- Repository for Cibersortx☆56Updated 3 years ago
- Repository for the R package EPIC, to Estimate the Proportion of Immune and Cancer cells from bulk gene expression data.☆79Updated last year
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆36Updated last month
- A docker image for single-cell analysis☆81Updated 2 weeks ago
- GENIE3 (GEne Network Inference with Ensemble of trees) R-package☆30Updated 2 years ago
- Geometry-preserving random sampling☆78Updated 3 months ago
- Gene group activity utility functions for Scanpy☆67Updated 2 months ago
- TENET is a tool for reconstructing gene regulatory networks from pseudo-time ordered single-cell transcriptomic data.☆40Updated 2 years ago