McGill-NLP / medalLinks
Large medical text dataset curated for abbreviation disambiguation, designed for natural language understanding pre-training in the medical domain
☆271Updated last year
Alternatives and similar repositories for medal
Users that are interested in medal are comparing it to the libraries listed below
Sorting:
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆147Updated last year
- ☆217Updated 6 months ago
- Recognize bio-medical entities from a text corpus☆124Updated last year
- Tools for curating biomedical training data for large-scale language modeling☆480Updated 6 months ago
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆95Updated 10 months ago
- Pre-trained Language Model for Biomedical Question Answering☆123Updated 2 years ago
- A project for developing transformer-based models for clinical relation extraction☆128Updated last year
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆160Updated 3 years ago
- ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)☆420Updated 2 years ago
- Code for the emrQA question answering dataset☆150Updated 3 years ago
- ☆98Updated 3 years ago
- Weakly supervised medical named entity classification☆73Updated 2 years ago
- SciFive: a text-text transformer model for biomedical literature☆95Updated last year
- Dataset for Natural Language Processing using a corpus of medical transcriptions and custom-generated clinical stop words and vocabulary.☆94Updated 4 years ago
- Library for clinical NLP with spaCy.☆576Updated last month
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆29Updated last year
- Medical Concept Annotation Tool☆501Updated this week
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆168Updated last year
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆178Updated 3 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆330Updated 3 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆296Updated 3 years ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆81Updated last month
- BioM-Transformers: Building Large Biomedical Language Models with BERT, ALBERT and ELECTRA☆37Updated last year
- Medical Question Answering Dataset of 47,457 QA pairs created from 12 NIH websites☆398Updated last year
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆81Updated this week
- BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).☆572Updated 2 years ago
- ☆38Updated 3 years ago
- Code for BEHRT: Transformer for Electronic Health Records☆111Updated 2 years ago
- ☆61Updated last year
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆31Updated last year