Large medical text dataset curated for abbreviation disambiguation, designed for natural language understanding pre-training in the medical domain
☆286Oct 18, 2023Updated 2 years ago
Alternatives and similar repositories for medal
Users that are interested in medal are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A rule-based Python module for spitting documents into sections.☆12Nov 14, 2020Updated 5 years ago
- init☆13Dec 4, 2024Updated last year
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆345Nov 9, 2021Updated 4 years ago
- Multimodal Question Answering in the Medical Domain: A summary of Existing Datasets and Systems☆317Oct 17, 2023Updated 2 years ago
- ☆64Jul 4, 2023Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Code for the emrQA question answering dataset☆153Feb 9, 2022Updated 4 years ago
- Biomedical concept relatedness benchmark sampled from electronic health records☆11Jul 14, 2022Updated 3 years ago
- Tools for curating biomedical training data for large-scale language modeling☆504Dec 9, 2024Updated last year
- ☆224Dec 11, 2024Updated last year
- BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).☆597Mar 25, 2023Updated 3 years ago
- Medical Concept Annotation Tool☆531Jul 25, 2025Updated 11 months ago
- Library for clinical NLP with spaCy.☆669Jun 4, 2026Updated last month
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆298Jan 12, 2022Updated 4 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆156Sep 13, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Dataset containing 7,025 discharge summary notes from the MIMIC III dataset annotated for 7 SBDHs☆20Jun 18, 2022Updated 4 years ago
- New approach to use Snomed-CT Concept using Word Embedding with Word2vec☆21Feb 27, 2019Updated 7 years ago
- ☆101Feb 25, 2022Updated 4 years ago
- This repository contains the code used for distillation and fine-tuning of compact biomedical transformers that have been introduced in t…☆19Mar 26, 2024Updated 2 years ago
- System for Medical Concept Extraction and Linking☆446Aug 12, 2024Updated last year
- The goal of the current application is to extract Concept-Value pairs for metrics measured during an echocardiogram study. The input is a…☆18Jun 4, 2023Updated 3 years ago
- Interpretable Evaluation for (Almost) All NLP Tasks☆194Sep 22, 2025Updated 9 months ago
- Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system☆26Nov 8, 2023Updated 2 years ago
- Medical Question Answering Dataset of 47,457 QA pairs created from 12 NIH websites☆455Oct 17, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Medical Question-Answering datasets prepared for the TREC 2017 LiveQA challenge (Medical Task)☆56May 13, 2026Updated last month
- A Python library to de-identify medical records with state-of-the-art NLP methods.☆148Nov 17, 2025Updated 7 months ago
- ☆38Mar 27, 2022Updated 4 years ago
- ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)☆442Oct 17, 2022Updated 3 years ago
- Epidemiological surveillance in Python☆11Mar 20, 2024Updated 2 years ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆164Jul 29, 2021Updated 4 years ago
- ☆29Aug 3, 2021Updated 4 years ago
- The corresponding code from our paper "DeCLUTR: Deep Contrastive Learning for Unsupervised Textual Representations". Do not hesitate to o…☆377Apr 21, 2023Updated 3 years ago
- UniHPF : Universal Healthcare Predictive Framework with Zero Domain Knowledge☆13Nov 16, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- OMOP <-> FHIR mapper☆11Mar 6, 2023Updated 3 years ago
- In-BoXBART: Get Instructions into Biomedical Multi-task Learning☆15Aug 23, 2022Updated 3 years ago
- Runtime repository for the SNOMED CT Entity Linking challenge on DrivenData☆14Mar 5, 2024Updated 2 years ago
- ☆71Feb 27, 2021Updated 5 years ago
- A collection of papers on automated medical coding from free-texts☆153Dec 21, 2024Updated last year
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆177Apr 18, 2022Updated 4 years ago
- Medical Text Mining and Information Extraction with spaCy☆438Nov 1, 2022Updated 3 years ago