Alternatives and similar repositories for Awesome-medical-coding-NLP

Users that are interested in Awesome-medical-coding-NLP are comparing it to the libraries listed below

• uf-hobi-informatics-lab / ClinicalTransformerNER
  a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms
  ☆154Updated 2 years ago
• Yale-LILY / Ascle
  A Python Natural Language Processing Toolkit for Medical Text Generation
  ☆83Updated 5 months ago
• GanjinZero / ICD-MSMN
  Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]
  ☆53Updated 3 years ago
• suamin / ICD-BERT
  ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)
  ☆77Updated 2 years ago
• facebookresearch / bio-lm
  We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.
  ☆162Updated 4 years ago
• 3mcloud / MDACE
  The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…
  ☆29Updated 2 years ago
• bvanaken / clinical-outcome-prediction
  Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration
  ☆95Updated last year
• MiuLab / PLM-ICD
  PLM-ICD: Automatic ICD Coding with Pretrained Language Models
  ☆73Updated last year
• whaleloops / KEPT
  auto icd coding with prompt
  ☆49Updated last year
• GanjinZero / CODER
  CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]
  ☆79Updated 3 years ago
• abachaa / Existing-Medical-QA-Datasets
  Multimodal Question Answering in the Medical Domain: A summary of Existing Datasets and Systems
  ☆306Updated 2 years ago
• JoakimEdin / medical-coding-reproducibility
  ☆89Updated last year
• Machine-Learning-for-Medical-Language / cnlp_transformers
  Transformers for Clinical NLP
  ☆25Updated 2 months ago
• acadTags / Explainable-Automated-Medical-Coding
  Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)
  ☆62Updated 3 years ago
• abachaa / MTS-Dialog
  A new collection of 1.7k doctor-patient conversations and corresponding clinical notes/summaries.
  ☆96Updated 4 months ago
• luoyuanlab / Clinical-Longformer
  ☆63Updated 2 years ago
• gmichalo / UmlsBERT
  ☆100Updated 3 years ago
• uf-hobi-informatics-lab / ClinicalTransformerRelationExtraction
  A project for developing transformer-based models for clinical relation extraction
  ☆130Updated 2 years ago
• uf-hobi-informatics-lab / GatorTron
  all scripts used in gatortron project
  ☆124Updated last year
• thomasnguyen92 / MIMIC-IV-ICD-data-processing
  ☆42Updated 2 years ago
• kexinhuang12345 / clinicalBERT
  ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)
  ☆427Updated 3 years ago
• dreji18 / Bio-Epidemiology-NER
  Recognize bio-medical entities from a text corpus
  ☆128Updated 2 years ago
• Georgetown-IR-Lab / QuickUMLS
  System for Medical Concept Extraction and Linking
  ☆419Updated last year
• panushri25 / emrQA
  Code for the emrQA question answering dataset
  ☆149Updated 3 years ago
• simonlevine / clinical-longformer
  ☆38Updated 3 years ago
• ZhiGroup / Med-BERT
  Med-BERT, contextualized embedding model for structured EHR data
  ☆307Updated last year
• abachaa / MedQuAD
  Medical Question Answering Dataset of 47,457 QA pairs created from 12 NIH websites
  ☆418Updated 2 years ago
• glee4810 / EHRSQL
  [NeurIPS'22] EHRSQL: A Practical Text-to-SQL Benchmark for Electronic Health Records
  ☆91Updated 11 months ago
• cambridgeltl / sapbert
  [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.
  ☆205Updated 2 years ago
• zhao-zy15 / PMC-Patients
  PMC-Patients
  ☆101Updated last year