3mcloud / MDACE
The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinical records. We believe that the release of MDACE will greatly improve the understanding and application of deep learning technologies for medical coding, and benefit machine learning models for classification.
☆28Updated last year
Alternatives and similar repositories for MDACE:
Users that are interested in MDACE are comparing it to the libraries listed below
- auto icd coding with prompt☆49Updated 11 months ago
- ☆36Updated last year
- Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]☆52Updated 2 years ago
- PLM-ICD: Automatic ICD Coding with Pretrained Language Models☆66Updated last year
- ☆59Updated last year
- A collection of papers on automated medical coding from free-texts☆139Updated 4 months ago
- ☆85Updated 8 months ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆147Updated last year
- A Python Natural Language Processing Toolkit for Medical Text Generation☆76Updated 6 months ago
- ☆38Updated 3 years ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆92Updated 10 months ago
- Blog post on Medium☆49Updated 2 years ago
- General tutorials for the setup and use of MedCAT.☆37Updated last week
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆31Updated 11 months ago
- Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system☆26Updated last year
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆78Updated 2 years ago
- Official Codes for "Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes"☆106Updated 8 months ago
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆95Updated 9 months ago
- ☆98Updated 3 years ago
- ☆18Updated last year
- Expert-Curated Oncology Reports to Advance Language Model Inference☆27Updated last year
- PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…☆66Updated last year
- Transformers for Clinical NLP☆24Updated this week
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆80Updated this week
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆61Updated 2 years ago
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆74Updated 2 years ago
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆45Updated last year
- PMC-Patients☆96Updated 10 months ago
- A new collection of 1.7k doctor-patient conversations and corresponding clinical notes/summaries.☆72Updated last year
- ☆29Updated 3 years ago