Code for the emrQA question answering dataset
☆153Feb 9, 2022Updated 4 years ago
Alternatives and similar repositories for emrQA
Users that are interested in emrQA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- CliniQG4QA: Generating Diverse Questions for Domain Adaptation of Clinical Question Answering☆23Feb 26, 2021Updated 5 years ago
- Medical Question Answering Dataset of 47,457 QA pairs created from 12 NIH websites☆462Oct 17, 2023Updated 2 years ago
- Machine reading comprehension on clinical case reports☆154Aug 28, 2025Updated 11 months ago
- BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.☆32Dec 3, 2019Updated 6 years ago
- Load all concepts and relationships from UMLS into a Neo4j database☆13Jan 29, 2021Updated 5 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Efficient Symptom Inquiring and Diagnosis via Adaptive Alignment of Reinforcement Learning and Classification [AI in Medicine Journal]☆14May 20, 2022Updated 4 years ago
- Medical Question-Answering datasets prepared for the TREC 2017 LiveQA challenge (Medical Task)☆56May 13, 2026Updated 2 months ago
- Quick script to parse out medications from discharge summaries in MIMIC format. Not that this approach uses minimal NLP, and can be vatly…☆30Nov 18, 2017Updated 8 years ago
- Clinical NER with UMLS lookup☆22Mar 20, 2020Updated 6 years ago
- ☆53May 2, 2021Updated 5 years ago
- Large medical text dataset curated for abbreviation disambiguation, designed for natural language understanding pre-training in the medic…☆285Oct 18, 2023Updated 2 years ago
- ConceptNet to neo4j 2.2☆10Nov 6, 2015Updated 10 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆347Nov 9, 2021Updated 4 years ago
- BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).☆598Mar 25, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Codes for the EMNLP'2020 paper "Predicting Clinical Trial Results by Implicit Evidence Integration".☆14Jan 13, 2021Updated 5 years ago
- ☆24Oct 23, 2020Updated 5 years ago
- The medical question entailment data introduced in the AMIA 2016 Paper (Recognizing Question Entailment for Medical Question Answering)☆14May 13, 2026Updated 2 months ago
- repository for Publicly Available Clinical BERT Embeddings☆773Aug 25, 2020Updated 5 years ago
- This repository contains the source code for the Semantic Knowledge Extractor Tool (SKET). SKET is an unsupervised hybrid knowledge extra…☆13Apr 18, 2023Updated 3 years ago
- A near real-time named-entity recognizer☆66Aug 3, 2026Updated last week
- Codes and Pre-trained models for RAMM: Retrieval-augmented Biomedical Visual Question Answering with Multi-modal Pre-training [ACM MM 202…☆29Nov 2, 2023Updated 2 years ago
- Crowdsourced ground truth for medical relation extraction.☆69Mar 18, 2019Updated 7 years ago
- Generative Biomedical Entity Linking via Knowledge Base-Guided Pre-training and Synonyms-Aware Fine-tuning [NAACL 2022]☆19Jan 27, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆97Aug 5, 2019Updated 7 years ago
- Text-to-SQL Generation for Question Answering on Electronic Medical Records☆136May 28, 2021Updated 5 years ago
- Clinical Pipeline Engine using Apache cTAKES☆24Nov 9, 2015Updated 10 years ago
- Bioinformatics'2020: BioBERT: a pre-trained biomedical language representation model for biomedical text mining☆2,202Aug 13, 2023Updated 2 years ago
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆66Aug 31, 2021Updated 4 years ago
- Visual Question Answering in the Medical Domain VQA-Med 2019☆95May 13, 2026Updated 2 months ago
- multilabel classification of EHR notes☆309Jul 21, 2020Updated 6 years ago
- Python Radiology Text Analysis System☆16Jul 31, 2023Updated 3 years ago
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆177Apr 18, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- HyPe: Better Pre-trained Language Model Fine-tuning with Hidden Representation Perturbation [ACL 2023]☆14Jul 11, 2023Updated 3 years ago
- Datasets for Question Answering by Search and Reading☆70Jan 19, 2018Updated 8 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆80Jun 28, 2022Updated 4 years ago
- "Knowledge Graph-based Question Answering with Electronic Health Records", accepted at Machine Learning for Health Care (MLHC) 2021☆39Feb 6, 2024Updated 2 years ago
- ☆24May 13, 2026Updated 2 months ago
- Author implementation of the paper "Decoupling Structure and Lexicon for Zero-Shot Semantic Parsing"☆18Nov 2, 2018Updated 7 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆298Jan 12, 2022Updated 4 years ago