allenai / ms2
☆66Updated 2 years ago
Alternatives and similar repositories for ms2:
Users that are interested in ms2 are comparing it to the libraries listed below
- A project for developing transformer-based models for clinical relation extraction☆127Updated last year
- BioELECTRA☆51Updated 3 years ago
- Multitask Learning with Pretrained Transformers☆39Updated 3 years ago
- Biomedical Data-to-Text Generation via Fine-Tuning Transformers☆28Updated 3 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated this week
- Pre-trained Language Model for Biomedical Question Answering☆122Updated last year
- Implementation of the BLUE benchmark with Transformers.☆20Updated last year
- ☆47Updated 3 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆146Updated last year
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆61Updated 3 years ago
- Implementation, trained models and result data for the paper "Aspect-based Document Similarity for Research Papers" #COLING2020☆62Updated 10 months ago
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]☆65Updated 2 years ago
- Multimodal Transformers for biomedical text and Knowledge Graph data☆33Updated 2 years ago
- BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.☆33Updated 5 years ago
- BioM-Transformers: Building Large Biomedical Language Models with BERT, ALBERT and ELECTRA☆35Updated last year
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆163Updated last year
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆158Updated 3 years ago
- A repository for our AAAI-2020 Cross-lingual-NER paper. Code will be updated shortly.☆47Updated 2 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- ☆97Updated 3 years ago
- ☆38Updated 2 years ago
- EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?☆55Updated 2 years ago
- SciFive: a text-text transformer model for biomedical literature☆94Updated 9 months ago
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆184Updated last year
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆41Updated 4 years ago
- MedDistant19: Towards an Accurate Benchmark for Broad-Coverage Biomedical Relation Extraction (COLING 2022)☆17Updated 2 years ago
- A fine-tuned BERT using EHR notes.☆14Updated 5 years ago
- This repository contains the code used for distillation and fine-tuning of compact biomedical transformers that have been introduced in t…☆18Updated 11 months ago
- Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system☆26Updated last year
- Clinical Text Summarization with Syntax-Based Negation and Semantic Concept Identification☆21Updated 5 years ago