bvanaken / clinical-outcome-prediction
Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration
☆91Updated 6 months ago
Alternatives and similar repositories for clinical-outcome-prediction:
Users that are interested in clinical-outcome-prediction are comparing it to the libraries listed below
- ☆38Updated 2 years ago
- ☆22Updated 3 years ago
- Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]☆52Updated 2 years ago
- auto icd coding with prompt☆48Updated 9 months ago
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆59Updated 2 years ago
- Pre-trained word embeddings using the text of published clinical case reports.☆14Updated 5 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆79Updated 2 years ago
- ☆35Updated last year
- A Label Attention Model for ICD Coding from Clinical Text☆69Updated 2 years ago
- Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system☆26Updated last year
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆146Updated last year
- A Python Natural Language Processing Toolkit for Medical Text Generation☆76Updated 3 months ago
- A collection of papers on automated medical coding from free-texts☆129Updated 2 months ago
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆26Updated last year
- ☆96Updated 2 years ago
- ☆57Updated last year
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆158Updated 3 years ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆91Updated 8 months ago
- BioM-Transformers: Building Large Biomedical Language Models with BERT, ALBERT and ELECTRA☆35Updated last year
- A project for developing transformer-based models for clinical relation extraction☆127Updated last year
- Code for the emrQA question answering dataset☆144Updated 3 years ago
- [NeurIPS'22] EHRSQL: A Practical Text-to-SQL Benchmark for Electronic Health Records☆75Updated 2 months ago
- ☆78Updated 5 months ago
- Patient Code & Text Representation Learning☆20Updated last year
- Code for the paper "Clinical Reading Comprehension: A Thorough Analysis of the emrQA Dataset" (ACL 2020)☆17Updated 4 years ago
- Weakly supervised medical named entity classification☆70Updated 2 years ago
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆42Updated last year
- PLM-ICD: Automatic ICD Coding with Pretrained Language Models☆64Updated last year
- ☆22Updated 2 years ago
- ☆26Updated 4 years ago