Yale-LILY / Ascle
A Python Natural Language Processing Toolkit for Medical Text Generation
☆76Updated 3 months ago
Alternatives and similar repositories for Ascle:
Users that are interested in Ascle are comparing it to the libraries listed below
- ☆57Updated last year
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆26Updated last year
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆146Updated last year
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆42Updated last year
- ☆38Updated 2 years ago
- Expert-Curated Oncology Reports to Advance Language Model Inference☆27Updated 10 months ago
- ☆96Updated 2 years ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆91Updated 8 months ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆30Updated 9 months ago
- PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…☆61Updated last year
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆59Updated 2 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆79Updated 2 years ago
- Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]☆52Updated 2 years ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆158Updated 3 years ago
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆91Updated 6 months ago
- Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system☆26Updated last year
- auto icd coding with prompt☆48Updated 9 months ago
- ☆35Updated last year
- A collection of papers on automated medical coding from free-texts☆129Updated 2 months ago
- Code for "A Data-Centric Approach To Generate Faithful and High Quality Patient Summaries with Large Language Models"☆12Updated 6 months ago
- A project for developing transformer-based models for clinical relation extraction☆127Updated last year
- ☆28Updated 3 years ago
- Clinical text summarization by adapting large language models☆133Updated 6 months ago
- Transformers for Clinical NLP☆23Updated 3 weeks ago
- BioM-Transformers: Building Large Biomedical Language Models with BERT, ALBERT and ELECTRA☆35Updated last year
- jayetri / DrugEHRQA-A-Question-Answering-Dataset-on-Structured-and-Unstructured-Electronic-Health-Records☆9Updated 2 years ago
- ☆25Updated last year
- Blog post on Medium☆47Updated 2 years ago
- ☆17Updated 10 months ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆79Updated this week