Yale-LILY / AscleLinks
A Python Natural Language Processing Toolkit for Medical Text Generation
☆83Updated 3 months ago
Alternatives and similar repositories for Ascle
Users that are interested in Ascle are comparing it to the libraries listed below
Sorting:
- ☆62Updated 2 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆152Updated 2 years ago
- Clinical text summarization by adapting large language models☆149Updated last year
- all scripts used in gatortron project☆122Updated last year
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆29Updated 2 years ago
- auto icd coding with prompt☆49Updated last year
- A collection of papers on automated medical coding from free-texts☆146Updated 8 months ago
- Official Codes for "Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes"☆107Updated last year
- ☆99Updated 3 years ago
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆95Updated last year
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆85Updated last week
- A project for developing transformer-based models for clinical relation extraction☆129Updated 2 years ago
- PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…☆67Updated last year
- PLM-ICD: Automatic ICD Coding with Pretrained Language Models☆71Updated last year
- Expert-Curated Oncology Reports to Advance Language Model Inference☆29Updated last year
- Recognize bio-medical entities from a text corpus☆127Updated 2 years ago
- This repository contains the code used for distillation and fine-tuning of compact biomedical transformers that have been introduced in t…☆19Updated last year
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆47Updated last year
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆79Updated 3 years ago
- ☆25Updated last year
- MedAlign is a clinician-generated dataset for instruction following with electronic medical records.☆97Updated 3 months ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆162Updated 4 years ago
- ☆89Updated last year
- Transformers for Clinical NLP☆25Updated last month
- ☆218Updated 9 months ago
- Large medical text dataset curated for abbreviation disambiguation, designed for natural language understanding pre-training in the medic…☆277Updated last year
- SciFive: a text-text transformer model for biomedical literature☆97Updated last year
- ☆38Updated 3 years ago
- Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system☆26Updated last year
- ☆29Updated 4 years ago