Alternatives and similar repositories for dome-ml

Users that are interested in dome-ml are comparing it to the libraries listed below

• research-software-ecosystem / content
  A metadata commons to store research software metadata
  ☆46Updated this week
• biopragmatics / biomappings
  🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…
  ☆58Updated last week
• elixir-europe / BioHackathon-projects-2019
  This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage proje…
  ☆26Updated 4 years ago
• pubseq / bh20-seq-resource
  Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis
  ☆13Updated 3 years ago
• stracquadaniolab / pygna
  A Python package for gene network analysis
  ☆32Updated 3 years ago
• monarch-initiative / biolink-api
  API for linked biological knowledge
  ☆66Updated 3 years ago
• monarch-initiative / dipper
  Data Ingestion Pipeline for Monarch
  ☆57Updated 3 years ago
• krishnanlab / txt2onto
  Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.
  ☆27Updated last year
• EBISPOT / efo
  Github repo for the Experimental Factor Ontology (EFO)
  ☆62Updated last week
• biopragmatics / bioregistry
  📮 An integrative registry of biological databases, ontologies, and nomenclatures.
  ☆140Updated this week
• phenopackets / phenopacket-tools
  An app and library for building, conversion, and validation of GA4GH Phenopackets.
  ☆16Updated 7 months ago
• bio-tools / biotoolsRegistry
  biotoolsregistry: discovery portal for bioinformatics
  ☆82Updated this week
• EBISPOT / OXO
  Ontology cross-reference and mapping service
  ☆20Updated last month
• MaayanLab / FAIRshake
  ☆10Updated 5 months ago
• ohsu-comp-bio / g2p-aggregator
  Associations of genomic features, drugs and diseases
  ☆48Updated 3 years ago
• edamontology / edamontology
  EDAM is an ontology of data analysis and data management in bio- and other sciences, and science-based applications. It comprises concept…
  ☆134Updated 2 months ago
• vpalombo / PANEV
  PaNeV: an R package for a pathway-based network visualization
  ☆10Updated 5 months ago
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆50Updated this week
• smangul1 / good.software
  This is the GitHub repository for our recent study "A comprehensive analysis of the usability and archival stability of omics computation…
  ☆23Updated 3 years ago
• pombase / canto
  The PomBase community curation tool
  ☆19Updated last week
• biocommons / eutils
  simplified searching, fetching, and parsing records from NCBI using their E-utilities interface
  ☆63Updated last month
• obophenotype / upheno
  The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.
  ☆83Updated 3 weeks ago
• BIMSBbioinfo / maui
  Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit
  ☆50Updated 2 years ago
• cancervariants / metakb
  Central repository for the VICC metakb web application
  ☆15Updated last week
• biocommons / bioutils
  provides common tools and lookup tables used primarily by the hgvs and uta packages
  ☆24Updated 3 weeks ago
• Knowledge-Graph-Hub / kg-obo
  A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub
  ☆32Updated last year
• kundajelab / genomelake
  Simple and efficient access to genomic data for deep learning models.
  ☆42Updated 6 years ago
• bio2bel / bio2bel
  A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)
  ☆21Updated 4 years ago
• monarch-initiative / talisman
  LLM-based gene function enrichment tool
  ☆14Updated 11 months ago
• monarch-initiative / pyphetools
  Python Phenopacket Tools
  ☆15Updated 3 months ago