Largefreedom / bio_anaylisLinks
the process of operating data types in the TCGA database
☆19Updated 4 years ago
Alternatives and similar repositories for bio_anaylis
Users that are interested in bio_anaylis are comparing it to the libraries listed below
Sorting:
- ☆56Updated 2 years ago
- ☆147Updated 10 months ago
- Her2 Breast Cancer Project☆87Updated 2 years ago
- Code for ST_IGI package☆34Updated 4 months ago
- ☆35Updated 4 years ago
- Spatial Transcriptomic Analysis using Reference-Free auxiliarY deep generative modeling and Shared Histology☆123Updated 5 months ago
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆73Updated last year
- Python packaging for CPTAC data☆107Updated last year
- ☆45Updated 7 months ago
- Self-supervised representation learning combining GTEx histology, RNA-seq and WGS☆31Updated 7 months ago
- Sub-cellular spatial transcriptomics Cell Segmentation☆68Updated 2 years ago
- Deep-Learning framework for multi-omic and survival data integration☆86Updated last year
- Deep learning on histopathology images.☆133Updated 4 years ago
- Super-resolved spatial transcriptomics by deep data fusion☆74Updated 2 years ago
- A pixel classification based multiplexed image segmentation pipeline☆101Updated last year
- ☆23Updated 7 months ago
- DCAP:Integrating multi-omics data with deep learning for predicting cancer prognosis☆21Updated 4 years ago
- SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention☆43Updated 5 months ago
- SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph con…☆243Updated 2 years ago
- This project consists of three parts: Random forest model for GC diagnosis and Predict the survival outcomes of GC patient using RSF meth…☆30Updated last year
- ☆36Updated 8 months ago
- Deep learning-based tissue compositions and cell-type-specific gene expression analysis with tissue-adaptive autoencoder (TAPE)☆56Updated last year
- ☆23Updated 7 months ago
- Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning☆80Updated last year
- ☆31Updated 9 months ago
- ☆125Updated 3 years ago
- Machine learning-based integrative analysis develops an immune-derived lncRNA signature for improving clinical outcomes in colorectal can…☆121Updated 5 months ago
- Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA☆62Updated last year
- PyTorch implementation of HisToGene☆43Updated 3 years ago
- ☆39Updated 5 months ago