Alternatives and similar repositories for NAT-ML

Users that are interested in NAT-ML are comparing it to the libraries listed below

• cclab-brca / neoadjuvant-therapy-response-predictor
  ☆56Updated 3 years ago
• gevaertlab / sequoia-pub
  SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention
  ☆44Updated 6 months ago
• GlastonburyC / RNAPath
  Self-supervised representation learning combining GTEx histology, RNA-seq and WGS
  ☆31Updated 7 months ago
• lanagarmire / DeepProg
  Deep-Learning framework for multi-omic and survival data integration
  ☆86Updated last year
• mahmoodlab / MAPS
  Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications
  ☆62Updated last year
• gerstung-lab / PC-CHiP
  Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis
  ☆77Updated 4 years ago
• daviddaiweizhang / istar
  ☆153Updated 11 months ago
• TencentAILabHealthcare / MLA-GNN
  ☆44Updated 11 months ago
• biomed-AI / Hist2ST
  ☆51Updated 3 years ago
• qalid7 / compath
  deep learning pipeline repository for the paper "Geospatial immune variability illuminates differential evolution of lung adenocarcinoma…
  ☆52Updated 5 years ago
• ratschlab / DeepSpot
  DeepSpot: Leveraging Spatial Context for Enhanced Spatial Transcriptomics Prediction from H&E Images
  ☆61Updated last month
• bowang-lab / BLEEP
  Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning
  ☆80Updated last year
• almaan / her2st
  Her2 Breast Cancer Project
  ☆87Updated 3 years ago
• bryanhe / ST-Net
  Deep learning on histopathology images.
  ☆136Updated 4 years ago
• Henrik86 / Topological-tumour-graphs
  ☆11Updated 5 years ago
• huangzhii / SALMON
  SALMON: Survival Analysis Learning with Multi-Omics Neural Networks
  ☆67Updated last year
• fsct135 / DCAP
  DCAP:Integrating multi-omics data with deep learning for predicting cancer prognosis
  ☆21Updated 4 years ago
• ludvb / xfuse
  Super-resolved spatial transcriptomics by deep data fusion
  ☆74Updated 2 years ago
• AI4SCR / ATHENA
  ☆36Updated last month
• googlebaba / StableCox
  Nature machine intelligence-Stable Cox Regression for Survival Analysis under Distribution Shifts
  ☆22Updated 7 months ago
• chenzRG / Cancer-Multi-Omics-Benchmark
  ☆66Updated last month
• BodenmillerGroup / SCPathology_publication
  The Single-Cell Pathology Landscape of Breast Cancer
  ☆27Updated 5 years ago
• zhangxiaoyu11 / OmiEmbed
  Multi-task deep learning framework for multi-omics data analysis
  ☆48Updated 3 years ago
• msk-mind / luna
  Scripts for data processing
  ☆48Updated last year
• Zaoqu-Liu / MOFS
  Multimodality Fusion Subtyping (Nature Communications)
  ☆30Updated 7 months ago
• ruitian-olivia / IGI-DL
  Code for ST_IGI package
  ☆34Updated 4 months ago
• owkin / HE2RNA_code
  Train a model to predict gene expression from histology slides.
  ☆110Updated 3 years ago
• rendeirolab / LazySlide
  Accessible and interoperable whole slide image analysis
  ☆167Updated last week
• kpcoleman / miso
  ☆32Updated 10 months ago
• chenhcs / SCS
  Sub-cellular spatial transcriptomics Cell Segmentation
  ☆68Updated 2 years ago