Alternatives and similar repositories for MetabWorkflowTutorial

Users that are interested in MetabWorkflowTutorial are comparing it to the libraries listed below

• borenstein-lab / microbiome-metabolome-curated-data
  ☆69Updated 7 months ago
• RASpicer / MetabolomicsTools
  ☆55Updated 4 years ago
• bigbio / ibaqpy
  Absolute quantification package based on quantms.io
  ☆14Updated 3 weeks ago
• bartongroup / Proteus
  R package for analysing proteomics data
  ☆49Updated 2 years ago
• MonashBioinformaticsPlatform / LFQ-Analyst
  The repo for LFQ-Analyst
  ☆30Updated 10 months ago
• robinschmid / microbe_masst
  Using MASST or fastMASST, adding metadata onto a tree ontology for microbes
  ☆19Updated 2 months ago
• singha53-zz / diablo
  DIABLO - an integrative multi-group, multi-dataset classification method
  ☆23Updated 6 years ago
• nf-core / quantms
  Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…
  ☆34Updated last year
• sib-swiss / intro-machine-learning-training
  ☆49Updated 3 weeks ago
• tidymass / tidymass
  tidymass
  ☆54Updated 3 weeks ago
• uc-bd2k / GREIN
  GREIN : GEO RNA-seq Experiments Interactive Navigator
  ☆49Updated 6 years ago
• biosustain / snakemake_UmetaFlow
  Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake
  ☆26Updated 5 months ago
• biocore / tcga
  Microbial analysis in TCGA data
  ☆91Updated last year
• saezlab / cosmosR
  COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…
  ☆61Updated 2 months ago
• evanpeikon / functional_enrichment_analysis
  A DIY guide to gene ontology, pathway, and gene set enrichment analysis
  ☆25Updated 9 months ago
• fgcz / prolfqua
  Differential Expression Analysis tool box R lang package for omics data
  ☆45Updated last week
• gexijin / idepGolem
  ☆38Updated last week
• broadinstitute / PANOPLY
  Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…
  ☆37Updated this week
• immunitastx / coding_exercise_TCGA_infiltration
  coding exercise using TCGA immune infiltration data
  ☆45Updated last year
• atc3 / maxquant_linux_guide
  A guide to running MaxQuant in Linux
  ☆33Updated 5 years ago
• andreasmock / MetaboDiff
  ☆30Updated 4 years ago
• Proteomicslab57357 / UniprotR
  Retrieving Information of Proteins from Uniprot
  ☆67Updated last year
• knights-lab / MLRepo
  ☆37Updated 3 years ago
• biocore / mmvec
  Neural networks for microbe-metabolite interaction analysis
  ☆120Updated 2 years ago
• bpucker / PythonTUBS
  Python introduction for life scientists
  ☆46Updated last month
• biocore / q2-qemistree
  Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".
  ☆31Updated 2 years ago
• pwilmart / TMT_analysis_examples
  Examples of TMT data analyses using R. Links to notebooks and repositories. Also a few spectral counting analyses.
  ☆22Updated 3 years ago
• shuzhao-li-lab / espol-workshop
  5-day workshop on Metabolomics and Data Analysis
  ☆16Updated 5 years ago
• ftwkoopmans / msdap
  MS-DAP: downstream analysis pipeline for quantitative proteomics
  ☆39Updated 3 months ago
• evanpeikon / Python_Fundamentals_Biology
  Python Fundamentals for Biologists
  ☆31Updated 6 months ago