https://cimcb.github.io/MetabWorkflowTutorial/
☆29Jul 21, 2022Updated 3 years ago
Alternatives and similar repositories for MetabWorkflowTutorial
Users that are interested in MetabWorkflowTutorial are comparing it to the libraries listed below
Sorting:
- cimcb is a package containing the necessary tools for the statistical analysis of untargeted and targeted metabolomics data.☆11Feb 22, 2023Updated 3 years ago
- metabolomics/lipidomics data processing☆10Feb 17, 2021Updated 5 years ago
- Mass spectral library manager☆13Apr 9, 2020Updated 5 years ago
- https://cimcb.github.io/MetabComparisonBinaryML/☆18Apr 19, 2024Updated last year
- Lithops-based Serverless implementation of the METASPACE spatial metabolomics annotation pipeline☆12Jul 6, 2023Updated 2 years ago
- Defined MRM transitions from untargeted metabolomics data☆11Nov 13, 2023Updated 2 years ago
- the Metagenomic test for Presence Or Absence of Pathways☆13Mar 4, 2019Updated 7 years ago
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆16Apr 25, 2023Updated 2 years ago
- Repository for MetaboShiny, a novel R and RShiny based metabolomics data analysis package.☆17Feb 13, 2026Updated last month
- Chemical Similarity Enrichment analysis of metabolomics datasets☆30Jul 19, 2024Updated last year
- ☆28Nov 30, 2023Updated 2 years ago
- ☆22Nov 12, 2025Updated 4 months ago
- ☆30Jul 30, 2024Updated last year
- R package for MetFrag☆24Sep 25, 2017Updated 8 years ago
- Geneyx Analysis API☆12Mar 15, 2026Updated last week
- R functions for automation of biomarker discovery based on processing downstream of large LC-MS datasets from any peak picking software☆10May 17, 2017Updated 8 years ago
- MemVerge Netflow Plugin☆16Jun 24, 2025Updated 8 months ago
- scripts for a Genetics Map software☆11Jan 7, 2018Updated 8 years ago
- A detailed guide to analise and integrate small-RNASeq and RNASeq samples using miARma-Seq☆11Oct 16, 2019Updated 6 years ago
- Make coverage plots from bam files!☆14Updated this week
- nf-test utility functions☆12Mar 5, 2026Updated 2 weeks ago
- Method to detect exonic CNVs in NGS Gene Targeted Panels☆16Dec 3, 2019Updated 6 years ago
- Drug Response Prediction and Biomarker Discovery Using Multi-Modal Deep Learning☆14Apr 24, 2024Updated last year
- The is mostly a wrapper tool using phyloseq and microbiome R packages.☆32Nov 23, 2022Updated 3 years ago
- 3DGB is a workflow to build 3D models of genomes from HiC data☆13Jan 26, 2026Updated last month
- multi-resolution clustering of omics data☆14Apr 9, 2025Updated 11 months ago
- The Open Life Science Analysis Platform☆24Sep 16, 2025Updated 6 months ago
- ☆14Dec 27, 2022Updated 3 years ago
- ☆12Mar 15, 2025Updated last year
- A Python Package for Mendelian Randomization Analysis☆18Sep 8, 2017Updated 8 years ago
- The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.☆34Mar 23, 2021Updated 4 years ago
- Detection and Visualization of Exon-Level Copy Number Variants in Targeted Next Generation Sequencing Data☆18Nov 26, 2021Updated 4 years ago
- Strain-level abundances estimation in metagenomic samples using variation graphs☆24Jan 29, 2023Updated 3 years ago
- ☆12Jul 10, 2022Updated 3 years ago
- Website for the 2021-2022 Caltech class Bi/BE/CS 183: Introduction to Computational Biology and Bioinformatics☆10Mar 11, 2022Updated 4 years ago
- RNAseq pipeline for alternative splicing junctions☆14Apr 23, 2025Updated 10 months ago
- Implementation of graph convolutional networks to predict chromatographic retention times.☆15Sep 7, 2021Updated 4 years ago
- A functional profiler for metagenomes using FracMinHash☆21Jul 14, 2025Updated 8 months ago
- Qiime2 snakemake pipeline☆20Dec 21, 2023Updated 2 years ago