Illumina / Isaac4Links
Isaac aligner version 4
☆19Updated 3 years ago
Alternatives and similar repositories for Isaac4
Users that are interested in Isaac4 are comparing it to the libraries listed below
Sorting:
- (WIP) best-practices workflow for rare disease☆62Updated last year
- create a gemini-compatible database from a VCF☆55Updated 5 years ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated 2 years ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- TIDDIT - structural variant calling☆78Updated last month
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆59Updated 8 years ago
- Structural variant (SV) analysis tools☆40Updated last year
- Evaluation of phasing performance☆23Updated 7 years ago
- Please consider using/contributing to https://github.com/nf-core/sarek☆41Updated 4 years ago
- Maximum likelihood demultiplexing☆50Updated 11 months ago
- a wee tool for random access into BGZF files.☆86Updated 7 years ago
- for visual evaluation of read support for structural variation☆55Updated last year
- Validation runs using bcbio: germline, somatic, structural variant calling and RNA-seq analyses☆31Updated 3 years ago
- R API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework☆41Updated 3 weeks ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆67Updated 3 years ago
- Ultra-efficient taxonomic mapping of NGS data☆51Updated 4 years ago
- Whole Exome/Whole Genome Sequencing alignment pipeline☆29Updated last year
- ☆55Updated 5 years ago
- Multi-sample somatic variant caller☆52Updated 4 years ago
- 10x Genomics Reads Simulator☆46Updated 2 years ago
- program for haplotype phasing from sequence reads and related tools☆25Updated 7 years ago
- A Framework to call Structural Variants from NGS based datasets☆22Updated 8 years ago
- Genomic VCF to tab-separated values☆48Updated 2 years ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆42Updated 5 months ago
- RUFUS k-mer based genomic variant detection☆54Updated 3 weeks ago
- Structural Variant Prediction Viewer☆35Updated 8 years ago
- A BioWDL variantcalling pipeline for germline DNA data. Starting with FASTQ files to produce VCF files. Category:Multi-Sample☆26Updated 2 years ago
- Method for detecting STR expansions from short-read sequencing data☆63Updated 4 years ago
- Tools for bam file processing☆55Updated 10 years ago
- A Strategy for Building and Using a Human Reference Pangenome☆71Updated 5 years ago