Isaac aligner version 4
☆19Feb 3, 2022Updated 4 years ago
Alternatives and similar repositories for Isaac4
Users that are interested in Isaac4 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This project is deprecated, please see strelka2 at https://github.com/Illumina/strelka☆37Feb 24, 2017Updated 9 years ago
- Collection of notes and scripts related to NGS☆14Feb 18, 2026Updated last month
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆42Mar 20, 2026Updated last week
- use the noise☆15Apr 15, 2020Updated 5 years ago
- Quality Control of Next Generation Sequencing Data☆21Jun 16, 2025Updated 9 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- MAGERI - Assemble, align and call variants for targeted genome re-sequencing with unique molecular identifiers☆22May 8, 2017Updated 8 years ago
- Automatic quality control for FASTQ sequencing files☆13Feb 27, 2018Updated 8 years ago
- TQSLE v1.0 released☆10Aug 29, 2023Updated 2 years ago
- genome basic statistics tool (e.g. n50, n10, ng50,...)☆15Mar 5, 2012Updated 14 years ago
- IMSEQ - IMmunogenetic SEQuence Analysis☆15Aug 10, 2018Updated 7 years ago
- Structural variant and indel caller for mapped sequencing data☆461Oct 11, 2025Updated 5 months ago
- SNp Exploration and Analysis using EPigenomics data☆11Jan 14, 2025Updated last year
- RNAseq analysis pipeline☆27Updated this week
- FLT3 ITD detection (ITDseek) and simulation (ITDsim)☆14Feb 27, 2019Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.☆99Jun 22, 2022Updated 3 years ago
- Tools for working with genomic and high throughput sequencing data.☆360Updated this week
- Various multi-trait association tests in R☆11Oct 30, 2018Updated 7 years ago
- FREE Divergence Error-Correcting DNA Barcodes☆10Jun 23, 2018Updated 7 years ago
- Thousand Variant Callers Project Repository☆73Oct 17, 2019Updated 6 years ago
- VCF-kit: Assorted utilities for the variant call format☆134Jul 10, 2025Updated 8 months ago
- The Ensembl Variation Perl API and SQL schema☆30Updated this week
- A python framework for inferring demography from tracts of identity by state as reported in PLoS Genetics by Harris and Nielsen (2013)☆15Aug 1, 2013Updated 12 years ago
- Predicting oncogenic potential of gene fusions☆13Feb 13, 2016Updated 10 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆28Oct 7, 2025Updated 5 months ago
- Blacktie: a streamlined interface to the popular tophat/cufflinks RNA-seq pipeline☆26Oct 5, 2015Updated 10 years ago
- An iobio app for examining gene variants☆20Sep 10, 2018Updated 7 years ago
- SAPLING: Suffix Array Piecewise Linear INdex for Genomics☆25Sep 1, 2020Updated 5 years ago
- Processing and analysis of data coming from Illumina sequencing machines☆10Mar 14, 2026Updated 2 weeks ago
- ☆24Jan 25, 2024Updated 2 years ago
- Tools for processing UMI RNA-tag data☆131Mar 15, 2023Updated 3 years ago
- shifts hg19/38 genomic position for feasible input format.☆12Jun 8, 2023Updated 2 years ago
- Deduplication for cfDNA sequencing data☆11Jul 5, 2017Updated 8 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Convert VCF (Variant Call Format) into TCGA MAF (Mutation Annotation Format)☆15Jul 15, 2016Updated 9 years ago
- Process Illumina instrument data into SAM/BAM/CRAM files.☆10Mar 9, 2026Updated 3 weeks ago
- SalmonTE is an ultra-Fast and Scalable Quantification Pipeline of Transpose Element (TE) Abundances☆92Jan 26, 2023Updated 3 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Jan 28, 2026Updated 2 months ago
- An application to compare genetic maps with D3 & Shiny☆22Feb 28, 2023Updated 3 years ago
- Generate HTML report for a set of genomic regions or DESeq2/edgeR results☆10Jan 14, 2025Updated last year
- ☆19Nov 21, 2024Updated last year