Tools for bioinformatics moved to http://git.genenetwork.org/pjotrp/bioinformatics
☆263Apr 12, 2022Updated 3 years ago
Alternatives and similar repositories for bioinformatics
Users that are interested in bioinformatics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Workshop content for http://dib-training.readthedocs.org/en/pub/2016-01-13-adv-beg-shell.html☆13Feb 23, 2018Updated 8 years ago
- A curated list of awesome Bioinformatics libraries and software.☆3,933Updated this week
- gemBS is a bioinformatics pipeline designed for high throughput analysis of DNA methylation from Whole Genome Bisulfite Sequencing data (…☆32Jan 28, 2022Updated 4 years ago
- Official documents of the Open Bioinformatics Foundation☆41Feb 18, 2026Updated last month
- Incubator for useful bioinformatics code, primarily in Python and R☆644Feb 5, 2025Updated last year
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- R package to quickly obtain count vectors from indexed bam files☆15Jun 13, 2025Updated 9 months ago
- A list of useful bioinformatics resources☆630Mar 22, 2026Updated 2 weeks ago
- Python for Bioinformatics☆263Oct 1, 2020Updated 5 years ago
- We aim to make it easier for biomedical researchers to access and customize synthetic sequence data for the purpose of sharing and testin…☆11Jul 22, 2019Updated 6 years ago
- Bioinformatics one liners from Ming Tang☆500Oct 4, 2020Updated 5 years ago
- Bring Your Own Bioinformatics☆27Apr 28, 2016Updated 9 years ago
- Useful bash one-liners for bioinformatics.☆2,003Sep 9, 2023Updated 2 years ago
- Bioinformatics containers☆780Mar 30, 2026Updated last week
- Bioinformatics Workbook repository☆207Mar 13, 2026Updated 3 weeks ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Lesson for the shell for genomics☆10Jan 12, 2021Updated 5 years ago
- Practical, reusable scripts for bioinformatics☆102Feb 12, 2019Updated 7 years ago
- Interactive lessons in bioinformatics.☆882Jul 19, 2021Updated 4 years ago
- Modular and universal bioinformatics☆313Nov 19, 2019Updated 6 years ago
- RNA-Sequencing data differential expression analysis pipeline. Performs: genome coverage (via bedtools and HTSeq), generates Circos code …☆56Nov 27, 2012Updated 13 years ago
- Quick Read Quality Control☆20Feb 28, 2023Updated 3 years ago
- A talk on Makesfiles in bioinformatics☆26Jul 18, 2013Updated 12 years ago
- A flexible framework for rapid genome analysis and interpretation☆319Oct 18, 2022Updated 3 years ago
- CAISC (Clonal Architecture with Integrating SNV and CNV): a software to integrate copy number variation and single nucleotide mutations f…☆13Jul 19, 2021Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- The C. elegans transcriptome at single cell resolution☆11Mar 28, 2018Updated 8 years ago
- bedtools - the swiss army knife for genome arithmetic☆1,027Mar 11, 2025Updated last year
- Lightweight workflows in bioinformatics:☆24Nov 5, 2014Updated 11 years ago
- Blacktie: a streamlined interface to the popular tophat/cufflinks RNA-seq pipeline☆26Oct 5, 2015Updated 10 years ago
- Tools for next-generation sequencing analysis☆89Jun 25, 2019Updated 6 years ago
- Tools for working with SAM/BAM data☆609Dec 22, 2024Updated last year
- Miscellaneous Bioinformatics scripts etc mostly in Python☆45Mar 2, 2026Updated last month
- Scripts for miscelleneous bioinformatics tasks☆49Jun 5, 2020Updated 5 years ago
- Materials for GCB535 at Penn.☆21Apr 19, 2019Updated 6 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Computational reproducibility using Continuous Integration to produce verifiable end-to-end runs of scientific analysis.☆83Dec 10, 2020Updated 5 years ago
- LEGACY repository for SODAR Core, preserved for saving review-related issues. See "sodar-core" for the up-to-date repository.☆15Jun 1, 2022Updated 3 years ago
- Java utilities for Bioinformatics☆519Mar 25, 2026Updated 2 weeks ago
- Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing☆133Jan 27, 2020Updated 6 years ago
- Tools for doing x way meta-analysis☆12Apr 12, 2022Updated 3 years ago
- A tool for running bioinformatics workflows locally or in the cloud.☆30Dec 13, 2019Updated 6 years ago
- Code and examples for JHU Computational Genomics class☆309Oct 22, 2024Updated last year