pjotrp / bioinformaticsLinks
Tools for bioinformatics moved to http://git.genenetwork.org/pjotrp/bioinformatics
☆261Updated 3 years ago
Alternatives and similar repositories for bioinformatics
Users that are interested in bioinformatics are comparing it to the libraries listed below
Sorting:
- FASTQ sequence quality visualisation with Emoji☆170Updated 6 months ago
- Interactive web-based genome browser.☆228Updated 6 years ago
- Biopieces is a bioinformatic framework of tools easily used and easily created.☆144Updated 7 years ago
- miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.☆182Updated 7 years ago
- Syntax highlighting for computational biology☆269Updated 2 years ago
- Text Only Genome Viewer!☆229Updated 5 months ago
- Spliced read mapper for RNA-Seq☆92Updated 2 years ago
- PAired-eND Assembler for DNA sequences☆137Updated 4 years ago
- annotate a VCF with other VCFs/BEDs/tabixed files☆391Updated 3 months ago
- Documentation of the Snakemake-Workflows project☆154Updated 3 years ago
- A basic introduction to Biopython, intended for a classroom based workshop. Now on Codeberg.☆225Updated 5 years ago
- BEDOPS: high-performance genomic feature operations☆354Updated 7 months ago
- Official QIIME 1 software repository. QIIME 2 (https://qiime2.org) has succeeded QIIME 1 as of January 2018.☆285Updated 2 years ago
- Qiita - A multi-omics databasing effort☆127Updated last week
- Bioconductor package "ballgown", devel version. Isoform-level differential expression analysis in R.☆148Updated 4 years ago
- Example Nextflow pipelines and programming techniques☆106Updated 2 months ago
- Short read de novo assembler using de Bruijn graphs, as published in: D.R. Zerbino and E. Birney. 2008. Velvet: algorithms for de novo sh…☆292Updated 2 months ago
- This repo provides tools to convert ClinVar data into a tab-delimited flat file, and also provides that resulting tab-delimited flat file…☆128Updated 5 years ago
- List of gene lists for genomic analyses.☆223Updated 3 years ago
- Python wrapper -- and more -- for BEDTools (bioinformatics tools for "genome arithmetic")☆327Updated 8 months ago
- Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data☆212Updated 5 years ago
- NGS Language Bindings☆119Updated 2 years ago
- FlowCraft: a component-based pipeline composer for omics analysis using Nextflow.☆244Updated 4 months ago
- HGVS variant name parsing and generation☆176Updated 2 years ago
- A small database of weird gene annotations☆204Updated 2 weeks ago
- GFF and GVF specification documents☆216Updated last year
- Count bases in BAM/CRAM files☆321Updated 3 years ago
- A 3'-end adapter contaminant trimmer☆95Updated 7 years ago
- a toolkit for working with Oxford nanopore data☆245Updated 2 years ago
- A flexible framework for rapid genome analysis and interpretation☆316Updated 3 years ago