pjotrp / bioinformaticsLinks
Tools for bioinformatics moved to http://git.genenetwork.org/pjotrp/bioinformatics
☆261Updated 3 years ago
Alternatives and similar repositories for bioinformatics
Users that are interested in bioinformatics are comparing it to the libraries listed below
Sorting:
- FASTQ sequence quality visualisation with Emoji☆171Updated 4 months ago
- Text Only Genome Viewer!☆229Updated 3 months ago
- Interactive web-based genome browser.☆227Updated 6 years ago
- Biopieces is a bioinformatic framework of tools easily used and easily created.☆142Updated 7 years ago
- PAired-eND Assembler for DNA sequences☆137Updated 4 years ago
- annotate a VCF with other VCFs/BEDs/tabixed files☆383Updated last month
- Example Nextflow pipelines and programming techniques☆106Updated 3 weeks ago
- Spliced read mapper for RNA-Seq☆92Updated 2 years ago
- Data intensive biology for everyone.☆40Updated 4 years ago
- a toolkit for working with Oxford nanopore data☆245Updated 2 years ago
- BEDOPS: high-performance genomic feature operations☆351Updated 5 months ago
- A basic introduction to Biopython, intended for a classroom based workshop. Now on Codeberg.☆224Updated 5 years ago
- Documentation of the Snakemake-Workflows project☆155Updated 3 years ago
- Windowed Adaptive Trimming for fastq files using quality☆224Updated 8 years ago
- GFF and GVF specification documents☆215Updated last year
- Language agnostic RESTful data access to Ensembl data over HTTP☆149Updated last week
- Intuitive graphical web interface for running BLAST bioinformatics tool (i.e. have your own custom NCBI BLAST site!)☆287Updated 2 weeks ago
- miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.☆182Updated 6 years ago
- Bioconductor package "ballgown", devel version. Isoform-level differential expression analysis in R.☆148Updated 4 years ago
- Official QIIME 1 software repository. QIIME 2 (https://qiime2.org) has succeeded QIIME 1 as of January 2018.☆285Updated 2 years ago
- A 3'-end adapter contaminant trimmer☆95Updated 7 years ago
- NGS Language Bindings☆118Updated last year
- A genotype query interface.☆136Updated 4 years ago
- FlowCraft: a component-based pipeline composer for omics analysis using Nextflow.☆245Updated 2 months ago
- UCSC command line bioinformatic utilities☆186Updated last year
- Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Imm…☆272Updated 2 months ago
- Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data☆212Updated 5 years ago
- Bioinformatics toolkits for manipulating sequence, alignment, and phylogenetic tree files☆128Updated 3 years ago
- Short read de novo assembler using de Bruijn graphs, as published in: D.R. Zerbino and E. Birney. 2008. Velvet: algorithms for de novo sh…☆293Updated 7 years ago
- Qiita - A multi-omics databasing effort☆127Updated last month