Alternatives and similar repositories for bds-files

Users that are interested in bds-files are comparing it to the libraries listed below

• crazyhottommy / RNA-seq-analysis
  RNAseq analysis notes from Ming Tang
  ☆1,058Updated 4 years ago
• griffithlab / rnaseq_tutorial
  Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis inclu…
  ☆1,411Updated 2 years ago
• crazyhottommy / ChIP-seq-analysis
  ChIP-seq analysis notes from Ming Tang
  ☆836Updated last year
• crazyhottommy / getting-started-with-genomics-tools-and-resources
  Unix, R and python tools for genomics and data science
  ☆1,351Updated 4 months ago
• crazyhottommy / bioinformatics-one-liners
  Bioinformatics one liners from Ming Tang
  ☆500Updated 5 years ago
• twbattaglia / RNAseq-workflow
  A repository for setting up a RNAseq workflow
  ☆450Updated 8 years ago
• jorvis / biocode
  Bioinformatics code libraries and scripts
  ☆553Updated 5 months ago
• YuLab-SMU / clusterProfiler
  A universal enrichment tool for interpreting omics data
  ☆1,153Updated last week
• jdidion / biotools
  A list of useful bioinformatics resources
  ☆620Updated 8 months ago
• nf-core / rnaseq
  RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
  ☆1,177Updated 2 weeks ago
• mikelove / awesome-multi-omics
  List of software packages for multi-omics analysis
  ☆883Updated last week
• quinlan-lab / applied-computational-genomics
  Applied Computational Genomics Course at UU: Spring 2020
  ☆1,071Updated last year
• tiagoantao / bioinf-python
  Python for Bioinformatics
  ☆262Updated 5 years ago
• hbctraining / DGE_workshop
  ☆406Updated 3 years ago
• openbiox / awosome-bioinformatics
  A curated list of resources for learning bioinformatics.
  ☆499Updated 3 years ago
• thelovelab / DESeq2
  Differential expression of RNA-seq data using the Negative Binomial
  ☆435Updated last month
• trinityrnaseq / trinityrnaseq
  Trinity RNA-Seq de novo transcriptome assembly
  ☆879Updated 11 months ago
• hbctraining / In-depth-NGS-Data-Analysis-Course
  ☆442Updated 5 years ago
• macs3-project / MACS
  MACS -- Model-based Analysis of ChIP-Seq
  ☆765Updated last month
• lh3 / seqtk
  Toolkit for processing sequences in FASTA/Q formats
  ☆1,520Updated 7 months ago
• MultiQC / MultiQC
  Aggregate results from bioinformatics analyses across many samples into a single report.
  ☆1,402Updated this week
• pachterlab / kallisto
  Near-optimal RNA-Seq quantification
  ☆713Updated last month
• kpatel427 / YouTubeTutorials
  ☆365Updated last year
• OpenGene / fastp
  An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
  ☆2,257Updated last month
• cmdcolin / awesome-genome-visualization
  A list of interesting genome browser and genome visualization programs
  ☆1,040Updated 2 weeks ago
• davidemms / OrthoFinder
  Phylogenetic orthology inference for comparative genomics
  ☆822Updated 5 months ago
• deeptools / deepTools
  Tools to process and analyze deep sequencing data.
  ☆751Updated 5 months ago
• hemberg-lab / scRNA.seq.course
  Analysis of single cell RNA-seq data course
  ☆677Updated 3 years ago
• compgenomr / book
  ☆381Updated last year
• hbctraining / Training-modules
  Materials for short, half-day workshops
  ☆342Updated last month