crs4 / ome_seadragon
OMERO.web app to support an image viewer based on OpenSeadragon
☆31Updated 2 years ago
Alternatives and similar repositories for ome_seadragon:
Users that are interested in ome_seadragon are comparing it to the libraries listed below
- ☆62Updated this week
- A versatile image analysis software for biological image-based quantification using machine learning, especially for whole slide imaging.☆61Updated 3 years ago
- Converts whole slide images to DICOM format☆19Updated 4 months ago
- ImageJ Ops: "Write once, run anywhere" image processing☆89Updated 5 months ago
- An ITK ImageIO module for the OpenSlide library.☆11Updated this week
- Deprecated: Read and write image data from and to TIFF files.☆61Updated 6 years ago
- The ImageJ plugin to run deep-learning models☆88Updated this week
- SlideRunner is a tool for massive cell annotations in whole slide images☆76Updated last year
- Python modules to work with large multiresolution images.☆199Updated this week
- The official deployment of the Digital Slide Archive and HistomicsTK.☆112Updated this week
- A Girder plugin for pathology image annotations and analysis.☆62Updated this week
- Bio-Formats image file format to raw format converter☆85Updated 2 months ago
- Lazily load multiscale whole-slide images with openslide and dask☆33Updated 2 years ago
- SCIFIO ImageIO plugin for ITK☆15Updated this week
- An OMERO.web app allowing to view images☆19Updated this week
- Read and write life sciences file formats☆133Updated 4 months ago
- A whole-slide image reader for TensorFlow☆23Updated 3 months ago
- NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF☆23Updated 7 months ago
- Digital Pathology Whole Slide Image Analysis Toolbox☆48Updated last year
- SlideJ: an ImageJ plugin for WSI processing☆15Updated 5 years ago
- Template to help create a new QuPath extension☆15Updated 3 weeks ago
- Python tool for stitching histopathology tissue fragments into artificial whole-mounts.☆19Updated 4 months ago
- This repository contains adaptations of the state-of-the-art deep learning based object detection models for the detection of cell nuclei…☆27Updated 2 years ago
- simple package for augmentation of n-dimensional arrays☆32Updated last year
- Microscopy Image Cytometry Toolkit☆116Updated 2 years ago
- multimodal whole slide image registration in a graph structure☆81Updated 6 months ago
- A fast and cross-platform image analysis framework for fluorescence time-lapse microscopy and bioimage informatics.☆43Updated 7 months ago
- czi reader from https://www.lfd.uci.edu/~gohlke/code/czifile.py.html☆15Updated 6 years ago
- Cytomine-Core is the main web server implementing the Cytomine API☆69Updated last year
- ☆40Updated 4 years ago