mathworks / MATLAB-support-for-Zarr-filesLinks
This repository provides an interface in MATLAB to read and write Zarr files. Zarr is a file format for scientific data (like HDF5 and netCDF) which is optimized for cloud storage and parallel computing environments.
☆18Updated last month
Alternatives and similar repositories for MATLAB-support-for-Zarr-files
Users that are interested in MATLAB-support-for-Zarr-files are comparing it to the libraries listed below
Sorting:
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Updated 2 years ago
- ☆18Updated this week
- ☆14Updated this week
- Browse your OMERO database from within napari.☆40Updated 3 weeks ago
- A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.☆63Updated this week
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated last month
- python tools for BigDataViewer☆22Updated last year
- Basic example of using OME-Zarr in a Nextflow pipeline☆20Updated 6 months ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆25Updated 10 months ago
- An open-use web application created for easy access, collaboration, and sharing of datasets through rich metadata search, filter, sort, a…☆15Updated this week
- GIve easy, high-level access to ome-zarr fileset☆22Updated 4 months ago
- Segment images utilizing pre-trained neural networks as feature extractors☆47Updated 2 weeks ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated this week
- ☆12Updated 5 months ago
- ☆51Updated 9 months ago
- A napari plugin for zarr backed OME-NGFF images☆43Updated 3 weeks ago
- native Python dataclasses for the OME data model☆65Updated last week
- "Defragmentation TS2: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: work…☆10Updated 2 years ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆102Updated last week
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆20Updated 2 years ago
- ☆13Updated 5 years ago
- A minimal dependency napari plugin giving access to scikit-image functions☆23Updated 5 months ago
- ☆49Updated 2 months ago
- A napari plugin to analysis point spread functions.☆12Updated 10 months ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆17Updated 7 months ago
- ImageJ convenience layer for N5☆19Updated this week
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆21Updated 3 months ago
- BIOMERO.analyzer - A python library for easy connecting between OMERO (jobs) and a Slurm cluster☆24Updated last week
- A 3D interactivity toolbox for napari☆37Updated 7 months ago
- Process and analyze surfaces using vedo in napari.☆25Updated last year